Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E | HIV Envelope ApexGT2 gp120 | polymer | 473 | 53070.3 | 3 | Human immunodeficiency virus 1 | ||
| 2 | B, D, F | HIV Envelope ApexGT2 gp41 | polymer | 162 | 18250.5 | 3 | UniProt (Q2N0S8) Pfam (PF00517) In PDB | Human immunodeficiency virus 1 | Env polyprotein |
| 3 | J, M, O | RM20A3 Fab Heavy Chain | polymer | 125 | 13511.1 | 3 | Macaca mulatta (Rhesus monkey) | ||
| 4 | K, N, P | RM20A3 Fab Light Chain | polymer | 128 | 13508.8 | 3 | Macaca mulatta (Rhesus monkey) | ||
| 5 | H | GT2-d42.16 Fab Heavy Chain | polymer | 134 | 15138.6 | 1 | Mus musculus (mouse) | ||
| 6 | L | GT2-d42.16 Fab Light Chain | polymer | 107 | 11479.7 | 1 | Mus musculus (mouse) | ||
| 7 | c, d, f, g, G... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 10 | In PDB GlyTouCan (G42666HT) | |||
| 8 | e, Q, Y | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 3 | In PDB GlyTouCan (G81315DD) | |||
| 9 | R | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 10 | S | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 1 | In PDB GlyTouCan (G55220VL) | |||
| 11 | a, b, h, i, T... | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 6 | In PDB GlyTouCan (G86851RC) | |||
| 12 | C, A, D, E, B... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 42 | Chemie (NAG) |
Sequence modifications
B, D, F: 510 - 664 (UniProt: Q2N0S8)
| PDB | External Database | Details |
|---|---|---|
| Ser 517 | Phe 518 | conflict |
| Pro 559 | Ile 558 | conflict |
| Pro 561 | Ala 560 | conflict |
| Asp 568 | Leu 567 | conflict |
| His 570 | Val 569 | conflict |
| His 585 | Arg 584 | conflict |
| Cys 605 | Thr 604 | conflict |
| Gly 665 | - | expression tag |
| Thr 666 | - | expression tag |
| Lys 667 | - | expression tag |
| His 668 | - | expression tag |
| His 669 | - | expression tag |
| His 670 | - | expression tag |
| His 671 | - | expression tag |
| His 672 | - | expression tag |
| His 673 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 14 |
| Total formula weight | 321640.4 | |
| Branched | Number of molecules | 21 |
| Total formula weight | 10515.8 | |
| Non-Polymers* | Number of molecules | 42 |
| Total formula weight | 9290.7 | |
| All* | Total formula weight | 341447.0 |
