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7S7C

Human Nuclear Exosome Targeting (NEXT) complex bound to RNA (substrate 2)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, F
(A, E)
Exosome RNA helicase MTR4polymer1045118225.02UniProt (P42285)
Pfam (PF00270)
Pfam (PF00271)
Pfam (PF21408)
Pfam (PF13234)
Pfam (PF08148)
Homo sapiens (Human)MTR4, MTREX,ATP-dependent RNA helicase DOB1,ATP-dependent RNA helicase SKIV2L2,Superkiller viralicidic activity 2-like 2,TRAMP-like complex helicase
2B, G
(B, F)
Zinc finger CCHC domain-containing protein 8polymer61869259.82UniProt (Q6NZY4)
Pfam (PF00098)
Pfam (PF04046)
Homo sapiens (Human)TRAMP-like complex RNA-binding factor ZCCHC8,TRAMP-like complex RNA-binding factor ZCCHC8
3C
(C)
RNA-binding protein 7polymer839463.01UniProt (Q9Y580)
Pfam (PF00076)
Homo sapiens (Human)RNA-binding motif protein 7
4D, E
(D, L)
RNA (30-MER)polymer289017.52synthetic construct
5H
(B)
ZINC IONnon-polymer65.41Chemie (ZN)
Sequence modifications
A, E: 1 - 1042 (UniProt: P42285)
PDBExternal DatabaseDetails
Ser -2-expression tag
Gly -1-expression tag
Asp 0-expression tag
B, F: 1 - 507 (UniProt: Q6NZY4)
PDBExternal DatabaseDetails
Ser -2-expression tag
Gly -1-expression tag
Asp 0-expression tag
B, F: 508 - 707 (UniProt: Q6NZY4)
C: 7 - 86 (UniProt: Q9Y580)
PDBExternal DatabaseDetails
Ser 4-expression tag
Gly 5-expression tag
Asp 6-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains7
Total formula weight402467.5
Non-Polymers*Number of molecules1
Total formula weight65.4
All*Total formula weight402532.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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