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7S7B

Human Nuclear exosome targeting (NEXT) complex homodimer bound to RNA (substrate 1)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, EExosome RNA helicase MTR4polymer1045118225.02UniProt (P42285)
Pfam (PF00270)
Pfam (PF00271)
Pfam (PF21408)
Pfam (PF13234)
Pfam (PF08148)
In PDB
Homo sapiens (Human)MTR4, MTREX,ATP-dependent RNA helicase DOB1,ATP-dependent RNA helicase SKIV2L2,Superkiller viralicidic activity 2-like 2,TRAMP-like complex helicase
2B, FZinc finger CCHC domain-containing protein 8,Zinc finger CCHC domain-containing protein 8polymer61869259.82UniProt (Q6NZY4)
Pfam (PF00098)
Pfam (PF04046)
In PDB
Homo sapiens (Human)TRAMP-like complex RNA-binding factor ZCCHC8,TRAMP-like complex RNA-binding factor ZCCHC8
3C, GRNA-binding protein 7polymer839463.02UniProt (Q9Y580)
Pfam (PF00076)
In PDB
Homo sapiens (Human)RNA-binding motif protein 7
4D, HRNA (46-MER)polymer4614605.82synthetic construct
5B, FZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
A, E: 1 - 1042 (UniProt: P42285)
PDBExternal DatabaseDetails
Ser -2-expression tag
Gly -1-expression tag
Asp 0-expression tag
B, F: 1 - 507 (UniProt: Q6NZY4)
PDBExternal DatabaseDetails
Ser -2-expression tag
Gly -1-expression tag
Asp 0-expression tag
B, F: 508 - 707 (UniProt: Q6NZY4)
C, G: 7 - 86 (UniProt: Q9Y580)
PDBExternal DatabaseDetails
Ser 4-expression tag
Gly 5-expression tag
Asp 6-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight423107.1
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight423238.0
*Water molecules are not included.

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PDB entries from 2024-07-10

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