7RM4
Neoantigen p53R175H-specific TCR 6-11 binds to p53R175H-HLA-A2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, F, K, P (A, F, K, P) | HLA class I histocompatibility antigen, A alpha chain | polymer | 275 | 31854.2 | 4 | UniProt (P04439) Pfam (PF00129) Pfam (PF07654) | Homo sapiens (Human) | Human leukocyte antigen A,HLA-A |
| 2 | B, G, L, Q (B, G, L, Q) | Beta-2-microglobulin | polymer | 100 | 11879.4 | 4 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (Human) | |
| 3 | C, H, M, R (C, H, M, R) | Cellular tumor antigen p53 peptide | polymer | 9 | 1114.3 | 4 | UniProt (P04637) | Homo sapiens (Human) | Antigen NY-CO-13,Phosphoprotein p53,Tumor suppressor p53 |
| 4 | D, I, N, S (D, I, N, S) | 6-11 T cell receptor beta chain | polymer | 246 | 27662.9 | 4 | Homo sapiens (Human) | ||
| 5 | E, J, O, T (E, J, O, T) | 6-11 T cell receptor alpha chain | polymer | 206 | 23342.0 | 4 | Homo sapiens (Human) |
Sequence modifications
A, F, K, P: 1 - 275 (UniProt: P04439)
B, G, L, Q: 2 - 100 (UniProt: P61769)
C, H, M, R: 1 - 9 (UniProt: P04637)
| PDB | External Database | Details |
|---|---|---|
| Gly 62 | Gln 86 | conflict |
| Lys 66 | Asn 90 | conflict |
| His 70 | Gln 94 | conflict |
| His 74 | Asp 98 | conflict |
| Val 95 | Ile 119 | conflict |
| Arg 97 | Ile 121 | conflict |
| Trp 107 | Gly 131 | conflict |
| His 114 | Arg 138 | conflict |
| Tyr 116 | Asp 140 | conflict |
| Lys 127 | Asn 151 | conflict |
| Thr 142 | Ile 166 | conflict |
| His 145 | Arg 169 | conflict |
| Val 152 | Glu 176 | conflict |
| Glu 161 | Asp 185 | conflict |
| Ala 184 | Pro 208 | conflict |
| Ala 193 | Pro 217 | conflict |
| Val 194 | Ile 218 | conflict |
| Ser 207 | Gly 231 | conflict |
| Gln 253 | Glu 277 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| PDB | External Database | Details |
|---|---|---|
| His 8 | Arg 175 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 20 |
| Total formula weight | 383411.4 | |
| All* | Total formula weight | 383411.4 |






