7RGF
Protocadherin gammaC4 EC1-4 crystal structure disrupted trans interface
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | Protocadherin gamma C4 | polymer | 429 | 47006.9 | 2 | UniProt (Q91XX0) Pfam (PF08266) Pfam (PF00028) | Mus musculus (Mouse) | Protocadherin gamma subfamily C,4 |
2 | C (C) | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1422.3 | 1 | In PDB GlyTouCan (G12398HZ) | |||
3 | D (D) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1260.2 | 1 | In PDB GlyTouCan (G07483YN) | |||
4 | E, F, U, V (A, B) | alpha-D-mannopyranose | non-polymer | 180.2 | 4 | Chemie (MAN) | |||
5 | G, W (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
6 | H (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
7 | AA, BA, CA, DA, EA... (B, A) | CALCIUM ION | non-polymer | 40.1 | 18 | Chemie (CA) | |||
8 | GA, HA, IA, JA, R... (B, A) | CHLORIDE ION | non-polymer | 35.5 | 7 | Chemie (CL) | |||
9 | KA, LA (A, B) | water | water | 18.0 | 125 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 421 (UniProt: Q91XX0)
PDB | External Database | Details |
---|---|---|
His 422 | - | expression tag |
His 423 | - | expression tag |
His 424 | - | expression tag |
His 425 | - | expression tag |
His 426 | - | expression tag |
His 427 | - | expression tag |
His 428 | - | expression tag |
His 429 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 94013.8 | |
Branched | Number of molecules | 2 |
Total formula weight | 2682.5 | |
Non-Polymers* | Number of molecules | 32 |
Total formula weight | 2224.7 | |
All* | Total formula weight | 98921.0 |