7RGF
Protocadherin gammaC4 EC1-4 crystal structure disrupted trans interface
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.944, 103.948, 200.592 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.160 - 2.400 |
R-factor | 0.1977 |
Rwork | 0.196 |
R-free | 0.24050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jgz |
RMSD bond length | 0.003 |
RMSD bond angle | 0.653 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.060 | 0.438 |
Rmeas | 0.073 | 0.560 |
Rpim | 0.040 | 0.342 |
Number of reflections | 42979 | 4175 |
<I/σ(I)> | 13.3 | 2.5 |
Completeness [%] | 98.9 | 92.6 |
Redundancy | 5.6 | 4 |
CC(1/2) | 0.999 | 0.924 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 293 | 1 M LiCl, 0.1 M Mes pH 6.0, and 10% (w/v) PEG6000 |