7RE3
SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, G | RNA-directed RNA polymerase | polymer | 932 | 106781.0 | 2 | UniProt (P0DTD1) Pfam (PF06478) Pfam (PF00680) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | Pol, RdRp, Non-structural protein 12, nsp12 |
2 | B, D, H, J | Non-structural protein 8 | polymer | 199 | 22034.2 | 4 | UniProt (P0DTD1) Pfam (PF08717) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | nsp8 |
3 | C, I | Non-structural protein 7 | polymer | 88 | 9748.4 | 2 | UniProt (P0DTD1) Pfam (PF08716) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | nsp7 |
4 | E, F, K, L | Helicase | polymer | 605 | 67354.0 | 4 | UniProt (P0DTD1) Pfam (PF20632) Pfam (PF20633) Pfam (PF20631) Pfam (PF13087) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | Hel, Non-structural protein 13, nsp13 |
5 | P, Q | Product RNA | polymer | 35 | 11141.6 | 2 | synthetic construct | ||
6 | T, U | Template RNA | polymer | 55 | 17573.4 | 2 | synthetic construct | ||
7 | F, G, K, A, L... | ZINC ION | non-polymer | 65.4 | 16 | Chemie (ZN) | |||
8 | F, G, K, A, L... | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
9 | F, G, K, A, L... | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 6 | Chemie (ADP) | |||
10 | F, K, L, E | ALUMINUM FLUORIDE | non-polymer | 84.0 | 4 | Chemie (AF3) | |||
11 | E, K | CHAPSO | non-polymer | 631.9 | 2 | Chemie (1N7) |
Sequence modifications
B, D, H, J: 1 - 198 (UniProt: P0DTD1)
C, I: 1 - 83 (UniProt: P0DTD1)
E, F, K, L: 1 - 601 (UniProt: P0DTD1)
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
PDB | External Database | Details |
---|---|---|
Gly -4 | - | expression tag |
Pro -3 | - | expression tag |
Val -2 | - | expression tag |
Asp -1 | - | expression tag |
Met 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Pro -2 | - | expression tag |
His -1 | - | expression tag |
Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 16 |
Total formula weight | 648041.9 | |
Non-Polymers* | Number of molecules | 34 |
Total formula weight | 5355.3 | |
All* | Total formula weight | 653397.2 |