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7RE3

SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC dimer

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, GRNA-directed RNA polymerasepolymer932106781.02UniProt (P0DTD1)
Pfam (PF06478)
Pfam (PF00680)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)Pol, RdRp, Non-structural protein 12, nsp12
2B, D, H, JNon-structural protein 8polymer19922034.24UniProt (P0DTD1)
Pfam (PF08717)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)nsp8
3C, INon-structural protein 7polymer889748.42UniProt (P0DTD1)
Pfam (PF08716)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)nsp7
4E, F, K, LHelicasepolymer60567354.04UniProt (P0DTD1)
Pfam (PF20632)
Pfam (PF20633)
Pfam (PF20631)
Pfam (PF13087)
In PDB
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)Hel, Non-structural protein 13, nsp13
5P, QProduct RNApolymer3511141.62synthetic construct
6T, UTemplate RNApolymer5517573.42synthetic construct
7F, G, K, A, L...ZINC IONnon-polymer65.416Chemie (ZN)
8F, G, K, A, L...MAGNESIUM IONnon-polymer24.36Chemie (MG)
9F, G, K, A, L...ADENOSINE-5'-DIPHOSPHATEnon-polymer427.26Chemie (ADP)
10F, K, L, EALUMINUM FLUORIDEnon-polymer84.04Chemie (AF3)
11E, KCHAPSOnon-polymer631.92Chemie (1N7)
Sequence modifications
B, D, H, J: 1 - 198 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Met 0-initiating methionine
C, I: 1 - 83 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly -4-expression tag
Pro -3-expression tag
Val -2-expression tag
Asp -1-expression tag
Met 0-expression tag
E, F, K, L: 1 - 601 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly -3-expression tag
Pro -2-expression tag
His -1-expression tag
Met 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight648041.9
Non-Polymers*Number of molecules34
Total formula weight5355.3
All*Total formula weight653397.2
*Water molecules are not included.

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PDB entries from 2024-07-10

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