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7QQB

Crystal structure of the envelope glycoprotein complex of Puumala virus in complex with the scFv fragment of the broadly neutralizing human antibody ADI-42898

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Envelope polyproteinpolymer88995672.62UniProt (A0A0B4U5I0)
UniProt (A0A6M3W7M6)
Pfam (PF01567)
Pfam (PF01561)
Pfam (PF20682)
Puumala orthohantavirusM polyprotein
2C, D
(H, L)
Single Chain Variable Fragment (scFv) of ADI-42898polymer29831558.82Homo sapiens
3E
(C)
alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1073.01In PDB
GlyTouCan (G56014GC)
4F, G
(D, E)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
5H
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
6I, J, K, L
(A, B, H, L)
waterwater18.026Chemie (HOH)
Sequence modifications
A, B: 20 - 381 (UniProt: A0A0B4U5I0)
PDBExternal DatabaseDetails
Arg 18-expression tag
Ser 19-expression tag
Asp 362Glu 362conflict
Gly 382-linker
Gly 383-linker
Ser 384-linker
Gly 385-linker
Leu 386-linker
Val 387-linker
Pro 388-linker
Arg 389-linker
Gly 390-linker
Ser 391-linker
Gly 392-linker
Gly 393-linker
Gly 394-linker
Ser 395-linker
Gly 396-linker
Gly 397-linker
Gly 398-linker
Ser 399-linker
Trp 400-linker
Ser 401-linker
His 402-linker
Pro 403-linker
Gln 404-linker
Phe 405-linker
Glu 406-linker
Lys 407-linker
Gly 408-linker
Gly 409-linker
Gly 410-linker
Thr 411-linker
Gly 412-linker
Gly 413-linker
Gly 414-linker
Thr 415-linker
Leu 416-linker
Val 417-linker
Pro 418-linker
Arg 419-linker
Gly 420-linker
Ser 421-linker
Gly 422-linker
Thr 423-linker
Gly 424-linker
Gly 425-linker
A, B: 426 - 860 (UniProt: A0A6M3W7M6)
PDBExternal DatabaseDetails
Gly 861-expression tag
Leu 862-expression tag
Val 863-expression tag
Pro 864-expression tag
Arg 865-expression tag
Gly 866-expression tag
Ser 867-expression tag
Gly 868-expression tag
Pro 869-expression tag
Phe 870-expression tag
Glu 871-expression tag
Asp 872-expression tag
Asp 873-expression tag
Asp 874-expression tag
Asp 875-expression tag
Lys 876-expression tag
Ala 877-expression tag
Gly 878-expression tag
Trp 879-expression tag
Ser 880-expression tag
His 881-expression tag
Pro 882-expression tag
Gln 883-expression tag
Phe 884-expression tag
Glu 885-expression tag
Lys 886-expression tag
Gly 887-expression tag
Gly 888-expression tag
Gly 889-expression tag
Ser 890-expression tag
Gly 891-expression tag
Gly 892-expression tag
Gly 893-expression tag
Ser 894-expression tag
Gly 895-expression tag
Gly 896-expression tag
Gly 897-expression tag
Ser 898-expression tag
Trp 899-expression tag
Ser 900-expression tag
His 901-expression tag
Pro 902-expression tag
Gln 903-expression tag
Phe 904-expression tag
Glu 905-expression tag
Lys 906-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight254462.8
BranchedNumber of molecules3
Total formula weight1921.8
Non-Polymers*Number of molecules1
Total formula weight92.1
All*Total formula weight256476.7
*Water molecules are not included.

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PDB entries from 2024-10-30

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