7QPI
Structure of lamprey VDR in complex with 1,25D3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Vitamin D receptor | polymer | 287 | 32406.0 | 1 | UniProt (Q7ZZY9) Pfam (PF00104) UniProt (by SIFTS) (S4R4S2) In PDB | Petromyzon marinus (sea lamprey) | |
| 2 | U | Nuclear receptor coactivator 1 | polymer | 13 | 1591.9 | 1 | UniProt (Q15788) In PDB | Homo sapiens | NCoA-1,Class E basic helix-loop-helix protein 74,bHLHe74,Protein Hin-2,RIP160,Renal carcinoma antigen NY-REN-52,Steroid receptor coactivator 1,SRC-1 |
| 3 | A | 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL | non-polymer | 416.6 | 1 | Chemie (VDX) | |||
| 4 | A | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 5 | water | water | 18.0 | 59 | Chemie (HOH) |
Sequence modifications
A: 0 - 282 (UniProt: Q7ZZY9)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Ser -3 | - | expression tag |
| His -2 | - | expression tag |
| Met -1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 33997.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 465.2 | |
| All* | Total formula weight | 34463.2 |
