7QPI
Structure of lamprey VDR in complex with 1,25D3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-24 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.320, 66.170, 105.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.760 - 2.500 |
R-factor | 0.1863 |
Rwork | 0.182 |
R-free | 0.25590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hc4 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.290 | 2.584 |
High resolution limit [Å] | 2.495 | 2.495 |
Number of reflections | 9594 | 855 |
<I/σ(I)> | 8.76 | |
Completeness [%] | 99.3 | |
Redundancy | 2 | |
CC(1/2) | 0.989 | 0.694 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | PEG 3350 25%, Tris 0.1M pH 8.5, magnesium chloride 0.2M |