7OLI
Crystal structure of Pab-AGOG in complex with 8-oxoguanosine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | N-glycosylase/DNA lyase | polymer | 242 | 27982.5 | 2 | UniProt (Q9UZY0) Pfam (PF09171) | Pyrococcus abyssi (strain GE5 / Orsay) | 8-oxoguanine DNA glycosylase,AGOG,DNA-(apurinic or apyrimidinic site) lyase,AP lyase |
| 2 | C, E (A, B) | 2'-DEOXY-8-OXOGUANOSINE | non-polymer | 283.2 | 2 | Chemie (8HG) | |||
| 3 | D, F, G, H, I (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 4 | J, K (A, B) | water | water | 18.0 | 336 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 239 (UniProt: Q9UZY0)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 55965.0 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 876.8 | |
| All* | Total formula weight | 56841.8 |
