7OLI
Crystal structure of Pab-AGOG in complex with 8-oxoguanosine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | N-glycosylase/DNA lyase | polymer | 242 | 27982.5 | 2 | UniProt (Q9UZY0) | Pyrococcus abyssi (strain GE5 / Orsay) | 8-oxoguanine DNA glycosylase,AGOG,DNA-(apurinic or apyrimidinic site) lyase,AP lyase |
| 2 | C, E (A, B) | 2'-DEOXY-8-OXOGUANOSINE | non-polymer | 283.2 | 2 | Chemie (8HG) PubChem (135424440) PubChem (135433642) PubChem (135440064) PubChem (135797838) PubChem (136188731) PubChem (136235779) PubChem (136254583) PubChem (136759846) PubChem (136785522) PubChem (136892576) PubChem (137117759) PubChem (137226077) PubChem (139493284) PubChem (163296296) PubChem (170585202) | |||
| 3 | D, F, G, H, I (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 4 | J, K (A, B) | water | water | 18.0 | 336 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 239 (UniProt: Q9UZY0)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 55965.0 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 876.8 | |
| All* | Total formula weight | 56841.8 |
