7NE1
Structure of the complex between Netrin-1 and its receptor Neogenin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Netrin-1 | polymer | 444 | 49600.8 | 1 | UniProt (O95631) Pfam (PF00055) Pfam (PF00053) In PDB | Homo sapiens (Human) | Epididymis tissue protein Li 131P |
2 | B | Neogenin | polymer | 354 | 39268.2 | 1 | UniProt (Q7TQG5) Pfam (PF00041) In PDB | Mus musculus (House mouse) | |
3 | G | 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose | branched | 982.8 | 1 | In PDB BIRD (PRD_900013) | |||
4 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
5 | A | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
6 | A | NITRATE ION | non-polymer | 62.0 | 3 | Chemie (NO3) |
Sequence modifications
A: 24 - 453 (UniProt: O95631)
B: 766 - 1107 (UniProt: Q7TQG5)
PDB | External Database | Details |
---|---|---|
Glu 22 | - | expression tag |
Thr 23 | - | expression tag |
Gly 454 | - | expression tag |
Thr 455 | - | expression tag |
Lys 456 | - | expression tag |
Thr 457 | - | expression tag |
Glu 458 | - | expression tag |
Thr 459 | - | expression tag |
Ser 460 | - | expression tag |
Gln 461 | - | expression tag |
Val 462 | - | expression tag |
Ala 463 | - | expression tag |
Pro 464 | - | expression tag |
Ala 465 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Glu 763 | - | expression tag |
Thr 764 | - | expression tag |
Gly 765 | - | expression tag |
Gly 1108 | - | expression tag |
Thr 1109 | - | expression tag |
Lys 1110 | - | expression tag |
His 1111 | - | expression tag |
His 1112 | - | expression tag |
His 1113 | - | expression tag |
His 1114 | - | expression tag |
His 1115 | - | expression tag |
His 1116 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 88869.0 | |
Branched | Number of molecules | 1 |
Total formula weight | 982.8 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 1110.9 | |
All* | Total formula weight | 90962.7 |