7LR0
Structure of squirrel TRPV1 in complex with capsaicin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Osm-9-like TRP channel 1 | polymer | 844 | 95902.8 | 4 | UniProt (I3LZN5) Pfam (PF12796) Pfam (PF00023) Pfam (PF00520) | Ictidomys tridecemlineatus (Thirteen-lined ground squirrel Spermophilus tridecemlineatus) | Transient receptor potential cation channel subfamily V member 1,Vanilloid receptor 1 |
| 2 | AA, BA, CA, DA, E... (C, A, D, B) | (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate | non-polymer | 760.1 | 28 | Chemie (POV) | |||
| 3 | G, HA, Q, Y (A, D, B, C) | (6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide | non-polymer | 305.4 | 4 | Chemie (4DY) | |||
| 4 | N (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) |
Sequence modifications
A, B, C, D: 1 - 840 (UniProt: I3LZN5)
| PDB | External Database | Details |
|---|---|---|
| Leu 841 | - | expression tag |
| Pro 842 | - | expression tag |
| Val 843 | - | expression tag |
| Arg 844 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 383611.1 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 22526.8 | |
| All* | Total formula weight | 406137.9 |
