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7KXB

Crystal structure of SARS-CoV-2 Nsp3 Macrodomain complex with PARG329

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Non-structural protein 3polymer16918114.71UniProt (P0DTD1)
Pfam (PF01661)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)Nsp3,PL2-PRO,Papain-like protease,Papain-like proteinase,PL-PRO
2B
(A)
N-{3-[(1,3-dimethyl-2,6-dioxo-2,3,6,9-tetrahydro-1H-purin-8-yl)sulfanyl]propyl}-N'-[2-(morpholin-4-yl)ethyl]thioureanon-polymer441.61Chemie (XB1)
3C
(A)
BETA-MERCAPTOETHANOLnon-polymer78.11Chemie (BME)
4D, E, F
(A)
SULFATE IONnon-polymer96.13Chemie (SO4)
5G
(A)
waterwater18.0181Chemie (HOH)
Sequence modifications
A: 3 - 169 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly 1-expression tag
Pro 2-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight18114.7
Non-Polymers*Number of molecules5
Total formula weight807.9
All*Total formula weight18922.6
*Water molecules are not included.

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PDB entries from 2025-06-11

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