7JZ0
Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1) and S-Adenosyl-L-homocysteine (SAH).
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C (A, C) | 2'-O-methyltransferase | polymer | 300 | 33556.4 | 2 | UniProt (P0DTD1) Pfam (PF06460) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | NSP16 |
2 | B, D (B, D) | Non-structural protein 10 | polymer | 141 | 15004.1 | 2 | UniProt (P0DTD1) Pfam (PF09401) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) | NSP10 |
3 | E, F (E, F) | RNA (5'-D(*(M7G))-R(P*(A2M)P*UP*U)-3') | polymer | 7 | 2338.4 | 2 | Severe acute respiratory syndrome coronavirus 2 | ||
4 | G, T (A, C) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 2 | Chemie (SAH) | |||
5 | H, I, U, V (A, C) | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
6 | AA, J, K, W, X... (C, A) | CHLORIDE ION | non-polymer | 35.5 | 7 | Chemie (CL) | |||
7 | BA, CA, L, M, N... (C, A, B) | FORMIC ACID | non-polymer | 46.0 | 8 | Chemie (FMT) | |||
8 | DA, EA, O, P (D, B) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
9 | FA, GA, HA, IA, JA... (A, B, C, D, E...) | water | water | 18.0 | 393 | Chemie (HOH) |
Sequence modifications
A, C: 6799 - 7096 (UniProt: P0DTD1)
B, D: 4254 - 4392 (UniProt: P0DTD1)
PDB | External Database | Details |
---|---|---|
Ser 6797 | - | expression tag |
Asn 6798 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 4252 | - | expression tag |
Asn 4253 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 101798.0 | |
Non-Polymers* | Number of molecules | 25 |
Total formula weight | 1738.8 | |
All* | Total formula weight | 103536.8 |