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7DIY

Crystal structure of SARS-CoV-2 nsp10 bound to nsp14-exoribonuclease domain

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
nsp10 proteinpolymer14415214.41UniProt (P0DTD1)
Pfam (PF09401)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)pp1ab,ORF1ab polyprotein
2B
(B)
nsp14-ExoN proteinpolymer29432992.01UniProt (P0DTD1)
Pfam (PF06471)
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV)pp1ab,ORF1ab polyprotein
3C, D, E, F
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
4G
(B)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5H, I
(A, B)
waterwater18.029Chemie (HOH)
Sequence modifications
A: 1 - 139 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly -4-expression tag
Pro -3-expression tag
Leu -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
B: 1 - 289 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly -4-expression tag
Pro -3-expression tag
Ala -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight48206.4
Non-Polymers*Number of molecules5
Total formula weight285.9
All*Total formula weight48492.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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