7C9O
Crystal structure of DNA-bound CCT/NF-YB/YC complex (HD1CCT/GHD8/OsNF-YC2)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Zinc finger protein HD1 | polymer | 67 | 8078.4 | 1 | UniProt (Q9FDX8) Pfam (PF06203) | Oryza sativa Japonica Group (Rice) | Protein CONSTANS-like,Protein HEADING DATE 1,OsHd1,Protein PHOTOPERIOD SENSITIVITY 1 |
| 2 | B (B) | Nuclear transcription factor Y subunit B-11 | polymer | 95 | 10849.4 | 1 | UniProt (Q0J7P4) Pfam (PF00808) | Oryza sativa Japonica Group (Rice) | OsNF-YB11,Protein DAYS TO HEADING 8,Protein HEADING DATE 5,Transcriptional activator HAP3H,OsHAP3H |
| 3 | C (C) | Nuclear transcription factor Y subunit C-2 | polymer | 104 | 11907.6 | 1 | UniProt (A6BLW4) Pfam (PF00125) | Oryza sativa Japonica Group (Rice) | OsNF-YC2,Transcriptional activator HAP5C,OsHAP5C |
| 4 | D (D) | DNA (25-MER) | polymer | 25 | 7531.9 | 1 | Oryza sativa | ||
| 5 | E (E) | DNA (25-MER) | polymer | 25 | 7825.0 | 1 | Oryza sativa | ||
| 6 | F, G, H, I (B, C, D, E) | water | water | 18.0 | 16 | Chemie (HOH) |
Sequence modifications
A: 323 - 387 (UniProt: Q9FDX8)
B: 54 - 147 (UniProt: Q0J7P4)
C: 167 - 268 (UniProt: A6BLW4)
| PDB | External Database | Details |
|---|---|---|
| His 321 | - | expression tag |
| Met 322 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 53 | - | initiating methionine |
| Ala 86 | Ser 86 | conflict |
| PDB | External Database | Details |
|---|---|---|
| His 165 | - | expression tag |
| Met 166 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 46192.4 | |
| All* | Total formula weight | 46192.4 |
