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6ZYU

Structure of the GluA2 ligand-binding domain (L483Y-N754S) in complex with glutamate and BPAM549

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Glutamate receptor 2,Glutamate receptor 2polymer26429301.73UniProt (P19491)
Pfam (PF10613)
Pfam (PF00060)
Rattus norvegicus (Rat)GluR-2,AMPA-selective glutamate receptor 2,GluR-B,GluR-K2,Glutamate receptor ionotropic,AMPA 2,GluA2,GluR-2,AMPA-selective glutamate receptor 2,GluR-B,GluR-K2,Glutamate receptor ionotropic,AMPA 2,GluA2
2BA, CA, D, E, R...
(C, A, B)
ZINC IONnon-polymer65.48Chemie (ZN)
3F
(A)
CACODYLATE IONnon-polymer137.01Chemie (CAC)
4DA, G, H, V, W
(C, A, B)
ACETATE IONnon-polymer59.05Chemie (ACT)
5EA, I, X
(C, A, B)
GLUTAMIC ACIDnon-polymer147.13Chemie (GLU)
6FA, J, Y
(C, A, B)
(4~{S})-4-cyclopropyl-7-fluoranyl-3,4-dihydro-2~{H}-thiochromene 1,1-dioxidenon-polymer240.33Chemie (QSZ)
7GA, K, Z
(C, A, B)
(4~{R})-4-cyclopropyl-7-fluoranyl-3,4-dihydro-2~{H}-thiochromene 1,1-dioxidenon-polymer240.33Chemie (QSW)
8HA, IA, JA, L, M...
(C, A)
GLYCEROLnon-polymer92.16Chemie (GOL)
9AA, KA, O, P, Q
(B, C, A)
CHLORIDE IONnon-polymer35.55Chemie (CL)
10LA, MA, NA
(A, B, C)
waterwater18.0532Chemie (HOH)
Sequence modifications
A, B, C: 3 - 117 (UniProt: P19491)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ala 2-expression tag
Tyr 94Leu 504engineered mutation
A, B, C: 120 - 264 (UniProt: P19491)
PDBExternal DatabaseDetails
Gly 118-linker
Thr 119-linker
Ser 242Asn 775engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight87905.2
Non-Polymers*Number of molecules34
Total formula weight3568.5
All*Total formula weight91473.6
*Water molecules are not included.

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PDB entries from 2025-07-09

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