6ZOO
Photosystem I reduced Plastocyanin Complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Photosystem I P700 chlorophyll a apoprotein A1 | polymer | 743 | 82717.7 | 1 | UniProt (A0A0F6NFW5) Pfam (PF00223) In PDB | Pisum sativum (Garden pea) | PSI-A,PsaA |
2 | B | Photosystem I P700 chlorophyll a apoprotein A2 | polymer | 733 | 82381.7 | 1 | UniProt (A0A0F6NGI2) Pfam (PF00223) In PDB | Pisum sativum (Garden pea) | PSI-B,PsaB |
3 | C | Photosystem I iron-sulfur center | polymer | 80 | 8860.3 | 1 | UniProt (P10793) Pfam (PF14697) In PDB | Pisum sativum (Garden pea) | 9 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC |
4 | D | PsaD | polymer | 143 | 16041.4 | 1 | UniProt (E1C9K8) Pfam (PF02531) In PDB | Pisum sativum (Garden pea) | |
5 | E | Putative uncharacterized protein | polymer | 66 | 7479.4 | 1 | UniProt (E1C9K6) Pfam (PF02427) In PDB | Pisum sativum (Garden pea) | |
6 | F | Photosystem I reaction center subunit III | polymer | 154 | 17137.9 | 1 | UniProt (A0A0M3KL12) Pfam (PF02507) In PDB | Pisum sativum (Garden pea) | |
7 | G | photosystem I reaction center | polymer | 97 | 10678.0 | 1 | UniProt (A0A0M3KL13) Pfam (PF01241) In PDB | Pisum sativum (Garden pea) | |
8 | H | Photosystem I reaction center subunit VI,Photosystem I reaction center subunit VI | polymer | 93 | 10043.3 | 1 | Pfam (PF03244) UniProt (by SIFTS) (A0A0M3KL10) In PDB | Pisum sativum (Garden pea) | |
9 | I | Photosystem I reaction center subunit VIII | polymer | 31 | 3409.2 | 1 | UniProt (P17227) Pfam (PF00796) In PDB | Pisum sativum (Garden pea) | PSI-I |
10 | J | Photosystem I reaction center subunit IX | polymer | 42 | 4767.6 | 1 | UniProt (D5MAL3) Pfam (PF01701) In PDB | Pisum sativum (Garden pea) | PSI-J |
11 | K | Photosystem I reaction center subunit X psaK | polymer | 81 | 8135.5 | 1 | UniProt (E1C9L3) Pfam (PF01241) In PDB | Pisum sativum (Garden pea) | |
12 | L | PsaL domain-containing protein | polymer | 159 | 16863.3 | 1 | Pfam (PF02605) UniProt (by SIFTS) (E1C9L1) In PDB | Pisum sativum (Garden pea) | |
13 | 1 | Chlorophyll a-b binding protein 6, chloroplastic | polymer | 193 | 21335.4 | 1 | UniProt (Q01667) Pfam (PF00504) In PDB | Pisum sativum (Garden pea) | LHCI-730,LHCII type III CAB-6,Light-harvesting complex protein Lhca1 |
14 | 2 | Chlorophyll a-b binding protein, chloroplastic | polymer | 208 | 22845.8 | 1 | UniProt (Q41038) Pfam (PF00504) In PDB | Pisum sativum (Garden pea) | |
15 | 3 | Chlorophyll a-b binding protein 3, chloroplastic | polymer | 221 | 24139.5 | 1 | UniProt (Q32904) Pfam (PF00504) In PDB | Pisum sativum (Garden pea) | LHCII type III CAB-3 |
16 | 4 | Chlorophyll a-b binding protein P4, chloroplastic | polymer | 198 | 21994.0 | 1 | UniProt (Q9SQL2) Pfam (PF00504) In PDB | Pisum sativum (Garden pea) | LHCI type III CAB-P4 |
17 | P | Plastocyanin, chloroplastic | polymer | 99 | 10353.5 | 1 | UniProt (P16002) Pfam (PF00127) In PDB | Pisum sativum (Garden pea) | |
18 | A | CHLOROPHYLL A ISOMER | non-polymer | 893.5 | 1 | Chemie (CL0) | |||
19 | A, B, 1, 3, J... | CHLOROPHYLL A | non-polymer | 893.5 | 142 | Chemie (CLA) | |||
20 | A, B | PHYLLOQUINONE | non-polymer | 450.7 | 2 | Chemie (PQN) | |||
21 | C, A | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 3 | Chemie (SF4) | |||
22 | I, J, F, K, A... | BETA-CAROTENE | non-polymer | 536.9 | 27 | Chemie (BCR) | |||
23 | 2, 3, 1, A, B... | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 8 | Chemie (LHG) | |||
24 | 2, A, G, B | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 6 | Chemie (LMT) | |||
25 | 2, 3, F, 1, B... | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 19 | Chemie (LMG) | |||
26 | A, B | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
27 | J, 3, F, 1, B... | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 7 | Chemie (DGD) | |||
28 | J, 4, 3, 2, 1 | (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | non-polymer | 568.9 | 8 | Chemie (LUT) | |||
29 | 1, 2, 3, 4 | CHLOROPHYLL B | non-polymer | 907.5 | 14 | Chemie (CHL) | |||
30 | 4, 2 | (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | non-polymer | 600.9 | 2 | Chemie (XAT) | |||
31 | 2 | 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE | non-polymer | 705.0 | 1 | Chemie (3PH) | |||
32 | P | COPPER (II) ION | non-polymer | 63.5 | 1 | Chemie (CU) | |||
33 | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
D: 74 - 211 (UniProt: E1C9K8)
E: 66 - 129 (UniProt: E1C9K6)
F: 78 - 231 (UniProt: A0A0M3KL12)
G: 58 - 154 (UniProt: A0A0M3KL13)
J: 1 - 42 (UniProt: D5MAL3)
K: 46 - 126 (UniProt: E1C9L3)
1: 40 - 232 (UniProt: Q01667)
4: 52 - 249 (UniProt: Q9SQL2)
PDB | External Database | Details |
---|---|---|
Gly 69 | - | insertion |
Phe 70 | - | insertion |
Thr 71 | - | insertion |
Pro 72 | - | insertion |
Pro 73 | - | insertion |
Glu 106 | Asp 33 | conflict |
Ser 161 | Asn 88 | conflict |
Pro 180 | Ala 107 | conflict |
Val 187 | Gln 114 | conflict |
PDB | External Database | Details |
---|---|---|
Pro 64 | - | insertion |
Pro 65 | - | insertion |
Gln 79 | Lys 14 | conflict |
Val 125 | Ile 60 | conflict |
Glu 126 | Val 61 | conflict |
Lys 129 | Glu 64 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 80 | Ser 3 | conflict |
Asp 87 | Glu 10 | conflict |
Leu 108 | Ile 31 | conflict |
Pro 111 | Ala 34 | conflict |
Gly 134 | Ala 57 | conflict |
Asp 188 | Glu 111 | conflict |
Thr 204 | Ser 127 | conflict |
Gly 205 | Arg 128 | conflict |
PDB | External Database | Details |
---|---|---|
Thr 106 | Ser 51 | conflict |
Val 112 | Ala 57 | conflict |
Ser 113 | Gly 58 | conflict |
Leu 114 | Val 59 | conflict |
Leu 115 | Ser 60 | conflict |
Asn 118 | - | insertion |
Asp 119 | - | insertion |
Pro 120 | - | insertion |
Val 121 | - | insertion |
Gly 122 | Ala 63 | conflict |
Phe 123 | Ala 64 | conflict |
Asn 124 | Ala 65 | conflict |
Ile 125 | Leu 66 | conflict |
PDB | External Database | Details |
---|---|---|
Phe 32 | Leu 32 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 86 | Val 42 | conflict |
PDB | External Database | Details |
---|---|---|
Asp 40 | His 47 | conflict |
Gln 45 | Glu 52 | conflict |
Ser 49 | Ala 56 | conflict |
Arg 65 | Gly 72 | conflict |
Glu 71 | Ala 78 | conflict |
Phe 76 | Tyr 83 | conflict |
Leu 102 | Tyr 109 | conflict |
Val 136 | Ala 143 | conflict |
Ser 141 | Ala 148 | conflict |
Phe 177 | Leu 184 | conflict |
His 178 | Glu 185 | conflict |
Tyr 180 | Leu 187 | conflict |
Ile 182 | Val 189 | conflict |
Val 185 | Ile 192 | conflict |
Ile 198 | Phe 205 | conflict |
Thr 225 | Asn 232 | conflict |
Asn 228 | Asp 235 | conflict |
Val 229 | Ile 236 | conflict |
Leu 230 | Val 237 | conflict |
PDB | External Database | Details |
---|---|---|
Lys 89 | Arg 89 | conflict |
Asp 128 | Ala 128 | conflict |
Phe 149 | Ser 149 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 17 |
Total formula weight | 369183.5 | |
Non-Polymers* | Number of molecules | 243 |
Total formula weight | 193975.4 | |
All* | Total formula weight | 563158.9 |