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6Z52

Crystal structure of CLK3 in complex with macrocycle ODS2003136

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Dual specificity protein kinase CLK3polymer36042318.42UniProt (P49761)
Pfam (PF00069)
Homo sapiens (Human)CDC-like kinase 3
2C, D, E, F, G...
(A, B)
1,2-ETHANEDIOLnon-polymer62.110Chemie (EDO)
3H, K, W, Y
(A, B)
CHLORIDE IONnon-polymer35.54Chemie (CL)
4AA, BA, CA, DA, EA...
(B, A)
IODIDE IONnon-polymer126.914Chemie (IOD)
5FA, Q
(B, A)
11,15-dimethyl-6-(4-methylpiperazin-1-yl)-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-onenon-polymer478.62Chemie (Q8T)
6GA, HA
(A, B)
waterwater18.0575Chemie (HOH)
Sequence modifications
A, B: 127 - 484 (UniProt: P49761)
PDBExternal DatabaseDetails
Ser 125-expression tag
Met 126-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight84636.8
Non-Polymers*Number of molecules30
Total formula weight3496.3
All*Total formula weight88133.2
*Water molecules are not included.

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PDB entries from 2026-02-04

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