6Z52
Crystal structure of CLK3 in complex with macrocycle ODS2003136
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-05-09 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.168, 116.909, 71.161 |
Unit cell angles | 90.00, 93.15, 90.00 |
Refinement procedure
Resolution | 19.580 - 2.120 |
R-factor | 0.1806 |
Rwork | 0.178 |
R-free | 0.23010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2eu9 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.564 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.870 | 19.655 | 2.230 |
High resolution limit [Å] | 2.120 | 6.700 | 2.120 |
Rmerge | 0.147 | 0.071 | 0.653 |
Rmeas | 0.175 | 0.083 | 0.770 |
Rpim | 0.093 | 0.042 | 0.404 |
Number of reflections | 55923 | 1713 | 8291 |
<I/σ(I)> | 6.3 | 7.8 | 2 |
Completeness [%] | 97.2 | 91 | 98.8 |
Redundancy | 3.4 | 3.7 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277.15 | 20.0% PEG 3350, 0.20M NaI, 0.1M bis-tris propane pH 7.5, 10.0% ethylene glycol |