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6YK5

Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-(2'-Amino-2'-carboxyethyl)-5,7-dihydrofuro[3,4-d]- pyrimidine-2,4(1H,3H)-dione at resolution 1.15A

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AGlutamate receptor 2polymer26429278.71UniProt (P19491)
Pfam (PF10613)
Pfam (PF00060)
Pfam (PF00497)
In PDB
Rattus norvegicus (Norway Rat)GluR-2,AMPA-selective glutamate receptor 2,GluR-B,GluR-K2,Glutamate receptor ionotropic,AMPA 2,GluA2
2AGLYCEROLnon-polymer92.14Chemie (GOL)
3ASULFATE IONnon-polymer96.16Chemie (SO4)
4ALITHIUM IONnon-polymer6.91Chemie (LI)
5A(S)-1-(2'-Amino-2'-carboxyethyl)-5,7-dihydrofuro[3,4-d]-pyrimidine-2,4(1H,3H)-dionenon-polymer241.21Chemie (PVK)
6ACHLORIDE IONnon-polymer35.51Chemie (CL)
7waterwater18.0446Chemie (HOH)
Sequence modifications
A: 3 - 117 (UniProt: P19491)
PDBExternal DatabaseDetails
Gly 1-expression tag
Ala 2-expression tag
A: 120 - 264 (UniProt: P19491)
PDBExternal DatabaseDetails
Gly 118-linker
Thr 119-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight29278.7
Non-Polymers*Number of molecules13
Total formula weight1228.3
All*Total formula weight30507.1
*Water molecules are not included.

220113

PDB entries from 2024-05-22

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