6YJM
Crystal Structure of the Catalytic Domain of ADAMTS-5 in Complex with the Inhibitor GLPG1972
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | A disintegrin and metalloproteinase with thrombospondin motifs 5 | polymer | 223 | 24701.0 | 2 | UniProt (Q9UNA0) Pfam (PF01421) | Homo sapiens (Human) | ADAMTS-5,A disintegrin and metalloproteinase with thrombospondin motifs 11,ADAMTS-11,ADMP-2,Aggrecanase-2 |
| 2 | C, H (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 3 | D, E, F, I, J... (A, B) | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 4 | G, L (A, B) | (5~{S})-5-[3-[(3~{S})-4-[3,5-bis(fluoranyl)phenyl]-3-methyl-piperazin-1-yl]-3-oxidanylidene-propyl]-5-cyclopropyl-imidazolidine-2,4-dione | non-polymer | 406.4 | 2 | Chemie (OU5) | |||
| 5 | M, N (A, B) | water | water | 18.0 | 94 | Chemie (HOH) |
Sequence modifications
A, B: 264 - 481 (UniProt: Q9UNA0)
| PDB | External Database | Details |
|---|---|---|
| Ser 262 | - | expression tag |
| Ile 263 | - | expression tag |
| Lys 282 | Leu 282 | engineered mutation |
| Val 482 | - | expression tag |
| Pro 483 | - | expression tag |
| Arg 484 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 49401.9 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1184.1 | |
| All* | Total formula weight | 50586.1 |
