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6YBM

Scaffold-ligand complex with ligand unmodelled.

Replaces:  6GJX
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Peptidyl-prolyl cis-trans isomerase F, mitochondrialpolymer16517783.33UniProt (P30405)
Pfam (PF00160)
Homo sapiens (Human)PPIase F,Cyclophilin D,CypD,Cyclophilin F,Mitochondrial cyclophilin,CyP-M,Rotamase F
2D, F, G
(A, C)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
3E
(A)
CITRIC ACIDnon-polymer192.11Chemie (CIT)
4H, I, J
(A, B, C)
waterwater18.0527Chemie (HOH)
Sequence modifications
A, B, C: 2 - 165 (UniProt: P30405)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ile 133Lys 175conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight53350.0
Non-Polymers*Number of molecules4
Total formula weight378.3
All*Total formula weight53728.3
*Water molecules are not included.

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PDB entries from 2025-10-29

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