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6YBM

Scaffold-ligand complex with ligand unmodelled.

Replaces:  6GJX
Functional Information from GO Data
ChainGOidnamespacecontents
A0000413biological_processprotein peptidyl-prolyl isomerization
A0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
A0006457biological_processprotein folding
B0000413biological_processprotein peptidyl-prolyl isomerization
B0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
B0006457biological_processprotein folding
C0000413biological_processprotein peptidyl-prolyl isomerization
C0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
C0006457biological_processprotein folding
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue EDO A 201
ChainResidue
AASN13
ASER153
AHOH324
AHOH340
CLYS125
CARG151
CTHR152

site_idAC2
Number of Residues13
Detailsbinding site for residue CIT A 202
ChainResidue
AHOH302
AHOH307
AHOH308
AHOH317
AHOH321
AHOH346
AHOH350
BPRO105
CGLY104
CPRO105
CARG151
AARG151
ALYS155

site_idAC3
Number of Residues7
Detailsbinding site for residue EDO C 201
ChainResidue
ASER147
AARG151
BLYS125
CASN13
CSER153
CHOH369
CHOH425

site_idAC4
Number of Residues4
Detailsbinding site for residue EDO C 202
ChainResidue
CTYR79
CPRO84
CHOH370
CHOH372

Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgStFHRVIpsFMcQAG
ChainResidueDetails
ATYR48-GLY65

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS25
BLYS25
CLYS25

site_idSWS_FT_FI2
Number of Residues9
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS44
AILE133
ALYS148
BLYS44
BILE133
BLYS148
CLYS44
CILE133
CLYS148

site_idSWS_FT_FI3
Number of Residues3
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ALYS125
BLYS125
CLYS125

site_idSWS_FT_FI4
Number of Residues3
DetailsMOD_RES: S-nitrosocysteine => ECO:0000250|UniProtKB:Q99KR7
ChainResidueDetails
ACYS161
BCYS161
CCYS161

219869

PDB entries from 2024-05-15

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