6Y5X

Structure of apo New Jersey Polyomavirus VP1

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E... (A, B, C, D, E...)	VP1	polymer	311	34096.6	10	UniProt (A0A024B5J2) Pfam (PF00718)	New Jersey polyomavirus-2013
2	AA, BA, CA, DA, EA... (E, F, G, A, H...)	GLYCEROL	non-polymer		92.1	26	Chemie (GOL)
3	FA, GA, M, N, NA... (F, A, H, I, C...)	MAGNESIUM ION	non-polymer		24.3	9	Chemie (MG)
4	AB, BB, CB, TA, UA... (H, I, J, A, B...)	water	water		18.0	948	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F, G, H, I, J: 35 - 322 (UniProt: A0A024B5J2)

PDB	External Database	Details
Met 12	-	initiating methionine
Gly 13	-	expression tag
Ser 14	-	expression tag
Ser 15	-	expression tag
His 16	-	expression tag
His 17	-	expression tag
His 18	-	expression tag
His 19	-	expression tag
His 20	-	expression tag
His 21	-	expression tag
Ser 22	-	expression tag
Ser 23	-	expression tag
Gly 24	-	expression tag
Leu 25	-	expression tag
Val 26	-	expression tag
Pro 27	-	expression tag
Arg 28	-	expression tag
Gly 29	-	expression tag
Ser 30	-	expression tag
His 31	-	expression tag
Met 32	-	expression tag
Leu 33	-	expression tag
Asp 34	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	10
	Total formula weight	340965.7
Non-Polymers*	Number of molecules	35
	Total formula weight	2613.2
All*	Total formula weight	343578.8

*Water molecules are not included.