6XUP
Archaeoglobus fulgidus Argonaute protein with DNA oligoduplex 5'-pATCGTGGCCACGAT
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Piwi protein | polymer | 441 | 50921.1 | 2 | UniProt (A0A101DYI0) Pfam (PF02171) UniProt (by SIFTS) (O28951) In PDB | Archaeoglobus fulgidus | |
2 | R, S, P, Q | 5'-D(*AP*TP*CP*GP*TP*GP*GP*CP*CP*AP*CP*GP*AP*TP)-3' | polymer | 14 | 4280.8 | 4 | Escherichia coli | ||
3 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
4 | A | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
5 | A, B | BETA-MERCAPTOETHANOL | non-polymer | 78.1 | 7 | Chemie (BME) | |||
6 | A, B | GLYCEROL | non-polymer | 92.1 | 7 | Chemie (GOL) | |||
7 | B, A | CACODYLATE ION | non-polymer | 137.0 | 2 | Chemie (CAC) | |||
8 | A | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
9 | water | water | 18.0 | 449 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 427 (UniProt: A0A101DYI0)
PDB | External Database | Details |
---|---|---|
Met -13 | - | initiating methionine |
Gly -12 | - | expression tag |
Ser -11 | - | expression tag |
Ser -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
Ser -3 | - | expression tag |
Gln -2 | - | expression tag |
Asp -1 | - | expression tag |
Pro 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 118965.4 | |
Non-Polymers* | Number of molecules | 21 |
Total formula weight | 1613.0 | |
All* | Total formula weight | 120578.4 |