6XP6
3C11-DQ2-glia-a2 complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, D) | MHC class II HLA-DQ-alpha chain | polymer | 191 | 21517.9 | 2 | UniProt (O19705) Pfam (PF00993) Pfam (PF07654) UniProt (by SIFTS) (P01909) | Homo sapiens (Human) | |
| 2 | B, D (B, E) | MHC class II HLA-DQ-beta-1 | polymer | 201 | 23374.2 | 2 | UniProt (O19712) Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (Q5Y7D3) | Homo sapiens (Human) | |
| 3 | E, F (H, J) | 3.C11 IgH Fab | polymer | 224 | 23575.5 | 2 | Homo sapiens (human) | ||
| 4 | G, H (G, I) | 3.C11 IgK Fab | polymer | 214 | 23426.9 | 2 | Homo sapiens (Human) | ||
| 5 | I, J (C, F) | DQ2-glia-a2 peptide | polymer | 26 | 2438.6 | 2 | Triticum aestivum | ||
| 6 | K, M, N (K, M, N) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
| 7 | L (L) | beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1203.1 | 1 | In PDB GlyTouCan (G98110NW) | |||
| 8 | O (O) | beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G40894EI) | |||
| 9 | P (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 10 | AA, BA, CA, EA, Q... (J, G, A, B, D...) | ISOPROPYL ALCOHOL | non-polymer | 60.1 | 12 | Chemie (IPA) | |||
| 11 | DA, FA, Y, Z (J, G, H) | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
| 12 | GA, HA, IA, JA, KA... (A, B, D, E, H...) | water | water | 18.0 | 815 | Chemie (HOH) |
Sequence modifications
A, D: -1 - 181 (UniProt: O19705)
B, E: 1 - 192 (UniProt: O19712)
| PDB | External Database | Details |
|---|---|---|
| Thr 182 | - | expression tag |
| Ser 183 | - | expression tag |
| Gly 184 | - | expression tag |
| Asp 185 | - | expression tag |
| Asp 186 | - | expression tag |
| Asp 187 | - | expression tag |
| Asp 188 | - | expression tag |
| Lys 189 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 0 | - | expression tag |
| Thr 193 | - | expression tag |
| Gly 194 | - | expression tag |
| Gly 195 | - | expression tag |
| Asp 196 | - | expression tag |
| Asp 197 | - | expression tag |
| Asp 198 | - | expression tag |
| Asp 199 | - | expression tag |
| Lys 200 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 188666.3 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 3225.0 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 1084.2 | |
| All* | Total formula weight | 192975.4 |
