6XP6
3C11-DQ2-glia-a2 complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | MHC class II HLA-DQ-alpha chain | polymer | 191 | 21517.9 | 2 | UniProt (O19705) Pfam (PF00993) Pfam (PF07654) UniProt (by SIFTS) (P01909) In PDB | Homo sapiens (Human) | |
2 | B, E | MHC class II HLA-DQ-beta-1 | polymer | 201 | 23374.2 | 2 | UniProt (O19712) Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (Q5Y7D3) In PDB | Homo sapiens (Human) | |
3 | H, J | 3.C11 IgH Fab | polymer | 224 | 23575.5 | 2 | Homo sapiens (human) | ||
4 | G, I | 3.C11 IgK Fab | polymer | 214 | 23426.9 | 2 | Homo sapiens (Human) | ||
5 | C, F | DQ2-glia-a2 peptide | polymer | 26 | 2438.6 | 2 | Triticum aestivum | ||
6 | K, M, N | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
7 | L | beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1203.1 | 1 | In PDB GlyTouCan (G98110NW) | |||
8 | O | beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G40894EI) | |||
9 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
10 | J, G, A, B, D... | ISOPROPYL ALCOHOL | non-polymer | 60.1 | 12 | Chemie (IPA) | |||
11 | J, G, H | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
12 | water | water | 18.0 | 815 | Chemie (HOH) |
Sequence modifications
A, D: -1 - 181 (UniProt: O19705)
B, E: 1 - 192 (UniProt: O19712)
PDB | External Database | Details |
---|---|---|
Thr 182 | - | expression tag |
Ser 183 | - | expression tag |
Gly 184 | - | expression tag |
Asp 185 | - | expression tag |
Asp 186 | - | expression tag |
Asp 187 | - | expression tag |
Asp 188 | - | expression tag |
Lys 189 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 0 | - | expression tag |
Thr 193 | - | expression tag |
Gly 194 | - | expression tag |
Gly 195 | - | expression tag |
Asp 196 | - | expression tag |
Asp 197 | - | expression tag |
Asp 198 | - | expression tag |
Asp 199 | - | expression tag |
Lys 200 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 188666.3 | |
Branched | Number of molecules | 5 |
Total formula weight | 3225.0 | |
Non-Polymers* | Number of molecules | 17 |
Total formula weight | 1084.2 | |
All* | Total formula weight | 192975.4 |