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6VGM

Crystal structure of DPO4 with 8-oxoadenine (oxoA) and dTTP*

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, D)
DNA polymerase IVpolymer34139019.52UniProt (A0A0E3K6E9)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
UniProt (by SIFTS) (Q97W02)
Saccharolobus solfataricusPol IV
2B, E
(B, P)
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3')polymer134096.72Homo sapiens
3C, F
(C, T)
DNA (5'-D(*TP*CP*AP*TP*(A38)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3')polymer185387.52Homo sapiens
4G, K
(A, D)
5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidinenon-polymer481.22Chemie (1FZ)
5H, I, J, L
(A, B, D)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
6M, N, O, P, Q
(A, B, C, D, T)
waterwater18.010Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight97007.4
Non-Polymers*Number of molecules6
Total formula weight1059.6
All*Total formula weight98067.0
*Water molecules are not included.

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PDB entries from 2026-01-21

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