6UOC
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant complexed with Givinostat
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Histone deacetylase 6 | polymer | 366 | 40278.6 | 1 | UniProt (F8W4B7) Pfam (PF00850) | Danio rerio (Zebrafish) | |
| 2 | B, C, D (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
| 3 | E (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | F, G (A) | POTASSIUM ION | non-polymer | 39.1 | 2 | Chemie (K) | |||
| 5 | H (A) | Givinostat | non-polymer | 421.5 | 1 | Chemie (QCM) | |||
| 6 | I (A) | water | water | 18.0 | 432 | Chemie (HOH) |
Sequence modifications
A: 60 - 419 (UniProt: F8W4B7)
| PDB | External Database | Details |
|---|---|---|
| Ser 54 | - | expression tag |
| Asn 55 | - | expression tag |
| Ala 56 | - | expression tag |
| Gly 57 | - | expression tag |
| Gly 58 | - | expression tag |
| Ser 59 | - | expression tag |
| Leu 330 | Lys 330 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 40278.6 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 751.3 | |
| All* | Total formula weight | 41029.9 |
