6UJ9
Crystal structure of HLA-B*07:02 with R140Q mutant IDH2 peptide in complex with Fab
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | HLA class I histocompatibility antigen, B-7 alpha chain | polymer | 298 | 34609.0 | 1 | UniProt (P01889) Pfam (PF00129) Pfam (PF07654) | Homo sapiens (Human) | MHC class I antigen B*7 |
2 | B (B) | Beta-2-microglobulin | polymer | 119 | 13732.5 | 1 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (Human) | |
3 | C (C) | Isocitrate dehydrogenase [NADP], mitochondrial | polymer | 10 | 1056.2 | 1 | UniProt (P48735) | Homo sapiens | IDH,ICD-M,IDP,NADP(+)-specific ICDH,Oxalosuccinate decarboxylase |
4 | D (L) | Fab light chain | polymer | 214 | 23449.0 | 1 | Homo sapiens (Human) | ||
5 | E (H) | Fab heavy chain | polymer | 218 | 23308.1 | 1 | Homo sapiens (Human) | ||
6 | F, G, H, O, Q... (A, B, L) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 6 | Chemie (PEG) | |||
7 | I (A) | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | non-polymer | 207.3 | 1 | Chemie (NHE) | |||
8 | J, K, L, M, N... (A, B, H) | SULFATE ION | non-polymer | 96.1 | 8 | Chemie (SO4) | |||
9 | U, V (C, H) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
A: 1 - 280 (UniProt: P01889)
C: 1 - 10 (UniProt: P48735)
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Gly 281 | - | expression tag |
Ser 282 | - | expression tag |
Leu 283 | - | expression tag |
His 284 | - | expression tag |
His 285 | - | expression tag |
Ile 286 | - | expression tag |
Leu 287 | - | expression tag |
Asp 288 | - | expression tag |
Ala 289 | - | expression tag |
Gln 290 | - | expression tag |
Lys 291 | - | expression tag |
Met 292 | - | expression tag |
Val 293 | - | expression tag |
Trp 294 | - | expression tag |
Asn 295 | - | expression tag |
His 296 | - | expression tag |
Arg 297 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gln 7 | Arg 140 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 96154.9 | |
Non-Polymers* | Number of molecules | 15 |
Total formula weight | 1612.5 | |
All* | Total formula weight | 97767.4 |