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6UJ9

Crystal structure of HLA-B*07:02 with R140Q mutant IDH2 peptide in complex with Fab

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
HLA class I histocompatibility antigen, B-7 alpha chainpolymer29834609.01UniProt (P01889)
Pfam (PF00129)
Pfam (PF07654)
Homo sapiens (Human)MHC class I antigen B*7
2B
(B)
Beta-2-microglobulinpolymer11913732.51UniProt (P61769)
Pfam (PF07654)
Homo sapiens (Human)
3C
(C)
Isocitrate dehydrogenase [NADP], mitochondrialpolymer101056.21UniProt (P48735)Homo sapiensIDH,ICD-M,IDP,NADP(+)-specific ICDH,Oxalosuccinate decarboxylase
4D
(L)
Fab light chainpolymer21423449.01Homo sapiens (Human)
5E
(H)
Fab heavy chainpolymer21823308.11Homo sapiens (Human)
6F, G, H, O, Q...
(A, B, L)
DI(HYDROXYETHYL)ETHERnon-polymer106.16Chemie (PEG)
7I
(A)
2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACIDnon-polymer207.31Chemie (NHE)
8J, K, L, M, N...
(A, B, H)
SULFATE IONnon-polymer96.18Chemie (SO4)
9U, V
(C, H)
waterwater18.02Chemie (HOH)
Sequence modifications
A: 1 - 280 (UniProt: P01889)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Gly 281-expression tag
Ser 282-expression tag
Leu 283-expression tag
His 284-expression tag
His 285-expression tag
Ile 286-expression tag
Leu 287-expression tag
Asp 288-expression tag
Ala 289-expression tag
Gln 290-expression tag
Lys 291-expression tag
Met 292-expression tag
Val 293-expression tag
Trp 294-expression tag
Asn 295-expression tag
His 296-expression tag
Arg 297-expression tag
C: 1 - 10 (UniProt: P48735)
PDBExternal DatabaseDetails
Gln 7Arg 140engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight96154.9
Non-Polymers*Number of molecules15
Total formula weight1612.5
All*Total formula weight97767.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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