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6UJ9

Crystal structure of HLA-B*07:02 with R140Q mutant IDH2 peptide in complex with Fab

Functional Information from GO Data
ChainGOidnamespacecontents
B0006955biological_processimmune response
B0042612cellular_componentMHC class I protein complex
Functional Information from PDB Data
site_idAC1
Number of Residues1
Detailsbinding site for residue PEG A 301
ChainResidue
AALA135

site_idAC2
Number of Residues2
Detailsbinding site for residue PEG A 302
ChainResidue
AGLU163
AGLU166

site_idAC3
Number of Residues2
Detailsbinding site for residue PEG A 303
ChainResidue
AGLN141
AARG145

site_idAC4
Number of Residues3
Detailsbinding site for residue NHE A 304
ChainResidue
AASP30
AGLN32
AARG239

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 A 305
ChainResidue
AARG75
AARG79
AGLN72

site_idAC6
Number of Residues1
Detailsbinding site for residue SO4 A 306
ChainResidue
AGLU161

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 A 307
ChainResidue
AASN86
AGLN87
HGLY54

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 A 308
ChainResidue
AARG79
HTYR57
HTHR58
HTYR59

site_idAC9
Number of Residues1
Detailsbinding site for residue SO4 A 309
ChainResidue
AGLU264

site_idAD1
Number of Residues5
Detailsbinding site for residue PEG B 501
ChainResidue
AARG6
APHE8
ATYR27
AASP29
BTYR83

site_idAD2
Number of Residues4
Detailsbinding site for residue SO4 B 502
ChainResidue
BILE55
BGLU56
BVAL57
BTYR86

site_idAD3
Number of Residues2
Detailsbinding site for residue PEG L 301
ChainResidue
AARG151
LSER52

site_idAD4
Number of Residues1
Detailsbinding site for residue PEG L 302
ChainResidue
LSER127

site_idAD5
Number of Residues4
Detailsbinding site for residue SO4 H 301
ChainResidue
HLYS30
HTYR55
HTHR74
HHOH401

site_idAD6
Number of Residues2
Detailsbinding site for residue SO4 H 302
ChainResidue
HTYR55
HASP56

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
ChainResidueDetails
LTYR192-HIS198
BTYR98-HIS104
HTYR199-HIS205
ATYR257-HIS263

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P33198
ChainResidueDetails
CSER1
ATYR84
ATHR143
ALYS146
AGLU152
ATYR159
ATYR171

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
ChainResidueDetails
BILE21

site_idSWS_FT_FI3
Number of Residues6
DetailsCARBOHYD: N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
ChainResidueDetails
BLYS39
BLYS61
BLYS68
BLYS78
BLYS111
BLYS114

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PDB entries from 2024-07-17

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