6TM3
Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylorubrum extorquens AM1 in a close conformation containing NADP+ and methylene-H4MPT
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Bifunctional protein MdtA | polymer | 303 | 31512.7 | 1 | UniProt (P55818) Pfam (PF09176) In PDB | Methylorubrum extorquens AM1 | |
2 | A | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 743.4 | 1 | Chemie (NAP) | |||
3 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
4 | A | 5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN | non-polymer | 788.7 | 1 | Chemie (H4M) | |||
5 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 14 | Chemie (EDO) | |||
6 | A | LITHIUM ION | non-polymer | 6.9 | 2 | Chemie (LI) | |||
7 | water | water | 18.0 | 501 | Chemie (HOH) |
Sequence modifications
A: 1 - 288 (UniProt: P55818)
PDB | External Database | Details |
---|---|---|
Val 289 | - | expression tag |
Asp 290 | - | expression tag |
Lys 291 | - | expression tag |
Leu 292 | - | expression tag |
Ala 293 | - | expression tag |
Ala 294 | - | expression tag |
Ala 295 | - | expression tag |
Leu 296 | - | expression tag |
Glu 297 | - | expression tag |
His 298 | - | expression tag |
His 299 | - | expression tag |
His 300 | - | expression tag |
His 301 | - | expression tag |
His 302 | - | expression tag |
His 303 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 31512.7 | |
Non-Polymers* | Number of molecules | 19 |
Total formula weight | 2507.0 | |
All* | Total formula weight | 34019.8 |