6SWY
Structure of active GID E3 ubiquitin ligase complex minus Gid2 and delta Gid9 RING domain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (5) | Vacuolar import and degradation protein 28 | polymer | 921 | 105658.2 | 1 | UniProt (P40547) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Glucose-induced degradation protein 5 |
| 2 | B (8) | Glucose-induced degradation protein 8 | polymer | 455 | 51789.2 | 1 | UniProt (P40208) Pfam (PF10607) | Saccharomyces cerevisiae S288c (Baker's yeast) | Dosage-dependent cell cycle regulator 1 |
| 3 | C (1) | Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30 | polymer | 1064 | 117308.9 | 1 | UniProt (P53076) Pfam (PF00622) Pfam (PF10607) | Saccharomyces cerevisiae S288c (Baker's yeast) | Glucose-induced degradation protein 1 |
| 4 | D (4) | Vacuolar import and degradation protein 24 | polymer | 362 | 41291.9 | 1 | UniProt (P38263) Pfam (PF09783) | Saccharomyces cerevisiae S288c (Baker's yeast) | Glucose-induced degradation protein 4 |
| 5 | E (9) | Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10 | polymer | 479 | 54432.9 | 1 | UniProt (P40492) Pfam (PF10607) | Saccharomyces cerevisiae S288c (Baker's yeast) | Function required for yeast viability protein 10,Glucose-induced degradation protein 9,Probable E3 ubiquitin-protein ligase GID9 |
Sequence modifications
5: 1 - 921 (UniProt: P40547)
1: 1 - 958 (UniProt: P53076)
1: 3785 - 3799 (PDB: 6SWY)
1: 3804 - 3827 (PDB: 6SWY)
1: 3830 - 3850 (PDB: 6SWY)
1: 3855 - 3880 (PDB: 6SWY)
1: 3890 - 3909 (PDB: 6SWY)
9: 1 - 3186 (UniProt: P40492)
9: 3187 - 3222 (PDB: 6SWY)
9: 3291 - 3302 (PDB: 6SWY)
| PDB | External Database | Details |
|---|---|---|
| Tyr 758 | Asn 758 | conflict |
1: 3785 - 3799 (PDB: 6SWY)
1: 3804 - 3827 (PDB: 6SWY)
1: 3830 - 3850 (PDB: 6SWY)
1: 3855 - 3880 (PDB: 6SWY)
1: 3890 - 3909 (PDB: 6SWY)
9: 1 - 3186 (UniProt: P40492)
9: 3187 - 3222 (PDB: 6SWY)
9: 3291 - 3302 (PDB: 6SWY)
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 370481.1 | |
| All* | Total formula weight | 370481.1 |
