6SWY

Structure of active GID E3 ubiquitin ligase complex minus Gid2 and delta Gid9 RING domain

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	5	Vacuolar import and degradation protein 28	polymer	921	105658.2	1	UniProt (P40547) In PDB	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)	Glucose-induced degradation protein 5
2	8	Glucose-induced degradation protein 8	polymer	455	51789.2	1	UniProt (P40208) Pfam (PF10607) In PDB	Saccharomyces cerevisiae S288c (Baker's yeast)	Dosage-dependent cell cycle regulator 1
3	1	Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30,Vacuolar import and degradation protein 30	polymer	1064	117308.9	1	UniProt (P53076) Pfam (PF00622) Pfam (PF10607) In PDB	Saccharomyces cerevisiae S288c (Baker's yeast)	Glucose-induced degradation protein 1
4	4	Vacuolar import and degradation protein 24	polymer	362	41291.9	1	UniProt (P38263) Pfam (PF09783) In PDB	Saccharomyces cerevisiae S288c (Baker's yeast)	Glucose-induced degradation protein 4
5	9	Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10,Protein FYV10	polymer	479	54432.9	1	UniProt (P40492) Pfam (PF10607) In PDB	Saccharomyces cerevisiae S288c (Baker's yeast)	Function required for yeast viability protein 10,Glucose-induced degradation protein 9,Probable E3 ubiquitin-protein ligase GID9

Sequence modifications

5: 1 - 921 (UniProt: P40547)

PDB	External Database	Details
Tyr 758	Asn 758	conflict

1: 1 - 958 (UniProt: P53076)
1: 3785 - 3799 (PDB: 6SWY)
1: 3804 - 3827 (PDB: 6SWY)
1: 3830 - 3850 (PDB: 6SWY)
1: 3855 - 3880 (PDB: 6SWY)
1: 3890 - 3909 (PDB: 6SWY)
9: 1 - 3186 (UniProt: P40492)
9: 3187 - 3222 (PDB: 6SWY)
9: 3291 - 3302 (PDB: 6SWY)

Contents of the asymmetric unit

Polymers	Number of chains	5
	Total formula weight	370481.1
All*	Total formula weight	370481.1

*Water molecules are not included.