6RIE
Structure of Vaccinia Virus DNA-dependent RNA polymerase co-transcriptional capping complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | DNA-dependent RNA polymerase subunit rpo147 | polymer | 1286 | 146995.7 | 1 | UniProt (Q1PIV1) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) UniProt (by SIFTS) (O57204) In PDB | Vaccinia virus | RNA polymerase 147,VACV094 |
| 2 | B | DNA-dependent RNA polymerase subunit rpo132 | polymer | 1164 | 133526.9 | 1 | UniProt (B9U1Q1) Pfam (PF04560) Pfam (PF12415) Pfam (PF04565) Pfam (PF04567) Pfam (PF00562) UniProt (by SIFTS) (Q76ZP7) In PDB | Vaccinia virus | |
| 3 | C | DNA-directed RNA polymerase 35 kDa subunit | polymer | 305 | 35430.7 | 1 | UniProt (B9U1R2) Pfam (PF03396) UniProt (by SIFTS) (O57233) In PDB | Vaccinia virus | |
| 4 | E | DNA-directed RNA polymerase subunit | polymer | 185 | 21365.7 | 1 | UniProt (B9U1I0) Pfam (PF05273) UniProt (by SIFTS) (P68609) In PDB | Vaccinia virus | |
| 5 | F | DNA-directed RNA polymerase 19 kDa subunit | polymer | 164 | 19020.1 | 1 | UniProt (B9U1M4) Pfam (PF05320) UniProt (by SIFTS) (Q76ZQ8) In PDB | Vaccinia virus | |
| 6 | G | DNA-dependent RNA polymerase subunit rpo18 | polymer | 161 | 17917.2 | 1 | UniProt (B9U1K4) Pfam (PF03293) UniProt (by SIFTS) (Q76ZS0) In PDB | Vaccinia virus | |
| 7 | J | DNA-dependent RNA polymerase subunit rpo7 | polymer | 63 | 7299.7 | 1 | UniProt (B9U1G3) Pfam (PF05864) UniProt (by SIFTS) (P68314) In PDB | Vaccinia virus | |
| 8 | L | Small subunit of mRNA capping enzyme | polymer | 287 | 33396.7 | 1 | UniProt (B9U1L2) Pfam (PF03341) UniProt (by SIFTS) (P04318) In PDB | Vaccinia virus | |
| 9 | N | Non-template DNA strand | polymer | 48 | 14775.5 | 1 | Vaccinia virus | ||
| 10 | O | Large subunit of mRNA capping enzyme | polymer | 844 | 96888.8 | 1 | UniProt (B9U1J2) Pfam (PF10640) Pfam (PF21004) Pfam (PF21005) Pfam (PF03291) UniProt (by SIFTS) (P04298) In PDB | Vaccinia virus | |
| 11 | P | RNA | polymer | 30 | 9822.8 | 1 | Vaccinia virus | ||
| 12 | S | DNA-directed RNA polymerase 30 kDa polypeptide | polymer | 259 | 29834.4 | 1 | UniProt (B9U1D1) Pfam (PF12410) Pfam (PF01096) UniProt (by SIFTS) (O57187) In PDB | Vaccinia virus | |
| 13 | T | Template strand DNA | polymer | 48 | 14786.5 | 1 | Vaccinia virus | ||
| 14 | A, O | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 15 | A, B, J | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 16 | O | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 13 |
| Total formula weight | 581060.6 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 708.7 | |
| All* | Total formula weight | 581769.3 |
