6PWK
Vibrio cholerae LapD S helix-GGDEF-EAL (bound to c-di-GMP)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | GGDEF and EAL domain-containing protein | polymer | 418 | 47325.1 | 2 | UniProt (A0A0H6T0A6) Pfam (PF00990) Pfam (PF00563) UniProt (by SIFTS) (A0A0H3AFX3) | Vibrio cholerae O1 str. 2010EL-1786 | |
| 2 | C, D, F, G (A, B) | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) | non-polymer | 690.4 | 4 | Chemie (C2E) | |||
| 3 | E, H (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 4 | I, J (A, B) | water | water | 18.0 | 40 | Chemie (HOH) |
Sequence modifications
A, B: 221 - 636 (UniProt: A0A0H6T0A6)
| PDB | External Database | Details |
|---|---|---|
| Ala 637 | - | expression tag |
| Ala 638 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 94650.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 2810.3 | |
| All* | Total formula weight | 97460.5 |
