6PPN
Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, I (A, I) | Mimic of unprocessed U6 snRNA | polymer | 6 | 1792.0 | 2 | synthetic construct | ||
| 2 | B, J (B, J) | U6 snRNA-associated Sm-like protein LSm2 | polymer | 96 | 11003.8 | 2 | UniProt (O94408) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 3 | C, K (C, K) | Probable U6 snRNA-associated Sm-like protein LSm3 | polymer | 95 | 10824.3 | 2 | UniProt (Q9Y7M4) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 4 | D, L (D, L) | Probable U6 snRNA-associated Sm-like protein LSm4 | polymer | 129 | 15007.0 | 2 | UniProt (O14352) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 5 | E, M (E, M) | U6 snRNA-associated Sm-like protein LSm5 | polymer | 80 | 8860.3 | 2 | UniProt (O42978) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 6 | F, N (F, N) | U6 snRNA-associated Sm-like protein LSm6 | polymer | 77 | 8489.6 | 2 | UniProt (Q9UUI1) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 7 | G, O (G, O) | U6 snRNA-associated Sm-like protein LSm7 | polymer | 119 | 13317.1 | 2 | UniProt (O74499) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 8 | H, P (H, P) | U6 snRNA-associated Sm-like protein LSm8 | polymer | 94 | 10572.0 | 2 | UniProt (O74483) Pfam (PF01423) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) | |
| 9 | AA, Q, R, S, T... (K, A, B, C, D...) | water | water | 18.0 | 94 | Chemie (HOH) |
Sequence modifications
C, K: 1 - 93 (UniProt: Q9Y7M4)
D, L: 1 - 121 (UniProt: O14352)
F, N: 1 - 75 (UniProt: Q9UUI1)
G, O: 1 - 113 (UniProt: O74499)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Trp 122 | - | expression tag |
| Ser 123 | - | expression tag |
| His 124 | - | expression tag |
| Pro 125 | - | expression tag |
| Gln 126 | - | expression tag |
| Phe 127 | - | expression tag |
| Glu 128 | - | expression tag |
| Lys 129 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| His 114 | - | expression tag |
| His 115 | - | expression tag |
| His 116 | - | expression tag |
| His 117 | - | expression tag |
| His 118 | - | expression tag |
| His 119 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 159732.3 | |
| All* | Total formula weight | 159732.3 |






