6PPN

Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA

Functional Information from GO Data

Chain	GOid	namespace	contents
B	0000398	biological_process	mRNA splicing, via spliceosome
B	0000932	cellular_component	P-body
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0005634	cellular_component	nucleus
B	0005681	cellular_component	spliceosomal complex
B	0005682	cellular_component	U5 snRNP
B	0005686	cellular_component	U2 snRNP
B	0005688	cellular_component	U6 snRNP
B	0005697	cellular_component	telomerase holoenzyme complex
B	0005730	cellular_component	nucleolus
B	0005737	cellular_component	cytoplasm
B	0006397	biological_process	mRNA processing
B	0008266	molecular_function	poly(U) RNA binding
B	0008380	biological_process	RNA splicing
B	0030620	molecular_function	U2 snRNA binding
B	0034337	biological_process	RNA folding
B	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
B	0071011	cellular_component	precatalytic spliceosome
B	0071013	cellular_component	catalytic step 2 spliceosome
B	0120115	cellular_component	Lsm2-8 complex
B	0140691	molecular_function	RNA folding chaperone
B	1905323	biological_process	telomerase holoenzyme complex assembly
B	1990726	cellular_component	Lsm1-7-Pat1 complex
B	1990904	cellular_component	ribonucleoprotein complex
C	0000398	biological_process	mRNA splicing, via spliceosome
C	0000932	cellular_component	P-body
C	0003682	molecular_function	chromatin binding
C	0003723	molecular_function	RNA binding
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005681	cellular_component	spliceosomal complex
C	0005682	cellular_component	U5 snRNP
C	0005686	cellular_component	U2 snRNP
C	0005688	cellular_component	U6 snRNP
C	0005697	cellular_component	telomerase holoenzyme complex
C	0005730	cellular_component	nucleolus
C	0005737	cellular_component	cytoplasm
C	0006397	biological_process	mRNA processing
C	0008266	molecular_function	poly(U) RNA binding
C	0008380	biological_process	RNA splicing
C	0030620	molecular_function	U2 snRNA binding
C	0033962	biological_process	P-body assembly
C	0034337	biological_process	RNA folding
C	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
C	0070034	molecular_function	telomerase RNA binding
C	0071011	cellular_component	precatalytic spliceosome
C	0071013	cellular_component	catalytic step 2 spliceosome
C	0120114	cellular_component	Sm-like protein family complex
C	0120115	cellular_component	Lsm2-8 complex
C	0140445	cellular_component	chromosome, telomeric repeat region
C	0140691	molecular_function	RNA folding chaperone
C	1990726	cellular_component	Lsm1-7-Pat1 complex
C	1990904	cellular_component	ribonucleoprotein complex
D	0000387	biological_process	spliceosomal snRNP assembly
D	0000398	biological_process	mRNA splicing, via spliceosome
D	0000932	cellular_component	P-body
D	0000956	biological_process	nuclear-transcribed mRNA catabolic process
D	0003723	molecular_function	RNA binding
D	0005515	molecular_function	protein binding
D	0005634	cellular_component	nucleus
D	0005681	cellular_component	spliceosomal complex
D	0005682	cellular_component	U5 snRNP
D	0005686	cellular_component	U2 snRNP
D	0005688	cellular_component	U6 snRNP
D	0005697	cellular_component	telomerase holoenzyme complex
D	0005730	cellular_component	nucleolus
D	0005737	cellular_component	cytoplasm
D	0005829	cellular_component	cytosol
D	0006396	biological_process	RNA processing
D	0006397	biological_process	mRNA processing
D	0008380	biological_process	RNA splicing
D	0017070	molecular_function	U6 snRNA binding
D	0030620	molecular_function	U2 snRNA binding
D	0033962	biological_process	P-body assembly
D	0034337	biological_process	RNA folding
D	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
D	0097525	cellular_component	spliceosomal snRNP complex
D	0097526	cellular_component	spliceosomal tri-snRNP complex
D	0120115	cellular_component	Lsm2-8 complex
D	0140691	molecular_function	RNA folding chaperone
D	1905323	biological_process	telomerase holoenzyme complex assembly
D	1990726	cellular_component	Lsm1-7-Pat1 complex
D	1990904	cellular_component	ribonucleoprotein complex
E	0000398	biological_process	mRNA splicing, via spliceosome
E	0003723	molecular_function	RNA binding
E	0005515	molecular_function	protein binding
E	0005634	cellular_component	nucleus
E	0005681	cellular_component	spliceosomal complex
E	0005682	cellular_component	U5 snRNP
E	0005686	cellular_component	U2 snRNP
E	0005688	cellular_component	U6 snRNP
E	0005697	cellular_component	telomerase holoenzyme complex
E	0005730	cellular_component	nucleolus
E	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
E	0006364	biological_process	rRNA processing
E	0006397	biological_process	mRNA processing
E	0008033	biological_process	tRNA processing
E	0008266	molecular_function	poly(U) RNA binding
E	0008380	biological_process	RNA splicing
E	0022613	biological_process	ribonucleoprotein complex biogenesis
E	0030620	molecular_function	U2 snRNA binding
E	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
E	0120115	cellular_component	Lsm2-8 complex
E	1905323	biological_process	telomerase holoenzyme complex assembly
E	1990726	cellular_component	Lsm1-7-Pat1 complex
E	1990904	cellular_component	ribonucleoprotein complex
F	0000398	biological_process	mRNA splicing, via spliceosome
F	0000932	cellular_component	P-body
F	0003723	molecular_function	RNA binding
F	0005515	molecular_function	protein binding
F	0005634	cellular_component	nucleus
F	0005681	cellular_component	spliceosomal complex
F	0005682	cellular_component	U5 snRNP
F	0005686	cellular_component	U2 snRNP
F	0005688	cellular_component	U6 snRNP
F	0005697	cellular_component	telomerase holoenzyme complex
F	0005730	cellular_component	nucleolus
F	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
F	0005737	cellular_component	cytoplasm
F	0006364	biological_process	rRNA processing
F	0006397	biological_process	mRNA processing
F	0008033	biological_process	tRNA processing
F	0008266	molecular_function	poly(U) RNA binding
F	0008380	biological_process	RNA splicing
F	0030490	biological_process	maturation of SSU-rRNA
F	0030620	molecular_function	U2 snRNA binding
F	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
F	0120114	cellular_component	Sm-like protein family complex
F	0120115	cellular_component	Lsm2-8 complex
F	1905323	biological_process	telomerase holoenzyme complex assembly
F	1990726	cellular_component	Lsm1-7-Pat1 complex
F	1990904	cellular_component	ribonucleoprotein complex
G	0000398	biological_process	mRNA splicing, via spliceosome
G	0000956	biological_process	nuclear-transcribed mRNA catabolic process
G	0003723	molecular_function	RNA binding
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005681	cellular_component	spliceosomal complex
G	0005682	cellular_component	U5 snRNP
G	0005686	cellular_component	U2 snRNP
G	0005688	cellular_component	U6 snRNP
G	0005697	cellular_component	telomerase holoenzyme complex
G	0005737	cellular_component	cytoplasm
G	0005829	cellular_component	cytosol
G	0006364	biological_process	rRNA processing
G	0006397	biological_process	mRNA processing
G	0008033	biological_process	tRNA processing
G	0008266	molecular_function	poly(U) RNA binding
G	0008380	biological_process	RNA splicing
G	0030620	molecular_function	U2 snRNA binding
G	0032991	cellular_component	protein-containing complex
G	0045292	biological_process	mRNA cis splicing, via spliceosome
G	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
G	0071004	cellular_component	U2-type prespliceosome
G	0071013	cellular_component	catalytic step 2 spliceosome
G	0097526	cellular_component	spliceosomal tri-snRNP complex
G	0120115	cellular_component	Lsm2-8 complex
G	1905323	biological_process	telomerase holoenzyme complex assembly
G	1990726	cellular_component	Lsm1-7-Pat1 complex
G	1990904	cellular_component	ribonucleoprotein complex
H	0000398	biological_process	mRNA splicing, via spliceosome
H	0003723	molecular_function	RNA binding
H	0003729	molecular_function	mRNA binding
H	0005515	molecular_function	protein binding
H	0005634	cellular_component	nucleus
H	0005681	cellular_component	spliceosomal complex
H	0005682	cellular_component	U5 snRNP
H	0005686	cellular_component	U2 snRNP
H	0005688	cellular_component	U6 snRNP
H	0005697	cellular_component	telomerase holoenzyme complex
H	0005737	cellular_component	cytoplasm
H	0006397	biological_process	mRNA processing
H	0008380	biological_process	RNA splicing
H	0030620	molecular_function	U2 snRNA binding
H	0032991	cellular_component	protein-containing complex
H	0034337	biological_process	RNA folding
H	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
H	0071011	cellular_component	precatalytic spliceosome
H	0120115	cellular_component	Lsm2-8 complex
H	0140691	molecular_function	RNA folding chaperone
H	1905323	biological_process	telomerase holoenzyme complex assembly
H	1990904	cellular_component	ribonucleoprotein complex
J	0000398	biological_process	mRNA splicing, via spliceosome
J	0000932	cellular_component	P-body
J	0003723	molecular_function	RNA binding
J	0005515	molecular_function	protein binding
J	0005634	cellular_component	nucleus
J	0005681	cellular_component	spliceosomal complex
J	0005682	cellular_component	U5 snRNP
J	0005686	cellular_component	U2 snRNP
J	0005688	cellular_component	U6 snRNP
J	0005697	cellular_component	telomerase holoenzyme complex
J	0005730	cellular_component	nucleolus
J	0005737	cellular_component	cytoplasm
J	0006397	biological_process	mRNA processing
J	0008266	molecular_function	poly(U) RNA binding
J	0008380	biological_process	RNA splicing
J	0030620	molecular_function	U2 snRNA binding
J	0034337	biological_process	RNA folding
J	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
J	0071011	cellular_component	precatalytic spliceosome
J	0071013	cellular_component	catalytic step 2 spliceosome
J	0120115	cellular_component	Lsm2-8 complex
J	0140691	molecular_function	RNA folding chaperone
J	1905323	biological_process	telomerase holoenzyme complex assembly
J	1990726	cellular_component	Lsm1-7-Pat1 complex
J	1990904	cellular_component	ribonucleoprotein complex
K	0000398	biological_process	mRNA splicing, via spliceosome
K	0000932	cellular_component	P-body
K	0003682	molecular_function	chromatin binding
K	0003723	molecular_function	RNA binding
K	0005515	molecular_function	protein binding
K	0005634	cellular_component	nucleus
K	0005681	cellular_component	spliceosomal complex
K	0005682	cellular_component	U5 snRNP
K	0005686	cellular_component	U2 snRNP
K	0005688	cellular_component	U6 snRNP
K	0005697	cellular_component	telomerase holoenzyme complex
K	0005730	cellular_component	nucleolus
K	0005737	cellular_component	cytoplasm
K	0006397	biological_process	mRNA processing
K	0008266	molecular_function	poly(U) RNA binding
K	0008380	biological_process	RNA splicing
K	0030620	molecular_function	U2 snRNA binding
K	0033962	biological_process	P-body assembly
K	0034337	biological_process	RNA folding
K	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
K	0070034	molecular_function	telomerase RNA binding
K	0071011	cellular_component	precatalytic spliceosome
K	0071013	cellular_component	catalytic step 2 spliceosome
K	0120114	cellular_component	Sm-like protein family complex
K	0120115	cellular_component	Lsm2-8 complex
K	0140445	cellular_component	chromosome, telomeric repeat region
K	0140691	molecular_function	RNA folding chaperone
K	1990726	cellular_component	Lsm1-7-Pat1 complex
K	1990904	cellular_component	ribonucleoprotein complex
L	0000387	biological_process	spliceosomal snRNP assembly
L	0000398	biological_process	mRNA splicing, via spliceosome
L	0000932	cellular_component	P-body
L	0000956	biological_process	nuclear-transcribed mRNA catabolic process
L	0003723	molecular_function	RNA binding
L	0005515	molecular_function	protein binding
L	0005634	cellular_component	nucleus
L	0005681	cellular_component	spliceosomal complex
L	0005682	cellular_component	U5 snRNP
L	0005686	cellular_component	U2 snRNP
L	0005688	cellular_component	U6 snRNP
L	0005697	cellular_component	telomerase holoenzyme complex
L	0005730	cellular_component	nucleolus
L	0005737	cellular_component	cytoplasm
L	0005829	cellular_component	cytosol
L	0006396	biological_process	RNA processing
L	0006397	biological_process	mRNA processing
L	0008380	biological_process	RNA splicing
L	0017070	molecular_function	U6 snRNA binding
L	0030620	molecular_function	U2 snRNA binding
L	0033962	biological_process	P-body assembly
L	0034337	biological_process	RNA folding
L	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
L	0097525	cellular_component	spliceosomal snRNP complex
L	0097526	cellular_component	spliceosomal tri-snRNP complex
L	0120115	cellular_component	Lsm2-8 complex
L	0140691	molecular_function	RNA folding chaperone
L	1905323	biological_process	telomerase holoenzyme complex assembly
L	1990726	cellular_component	Lsm1-7-Pat1 complex
L	1990904	cellular_component	ribonucleoprotein complex
M	0000398	biological_process	mRNA splicing, via spliceosome
M	0003723	molecular_function	RNA binding
M	0005515	molecular_function	protein binding
M	0005634	cellular_component	nucleus
M	0005681	cellular_component	spliceosomal complex
M	0005682	cellular_component	U5 snRNP
M	0005686	cellular_component	U2 snRNP
M	0005688	cellular_component	U6 snRNP
M	0005697	cellular_component	telomerase holoenzyme complex
M	0005730	cellular_component	nucleolus
M	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
M	0006364	biological_process	rRNA processing
M	0006397	biological_process	mRNA processing
M	0008033	biological_process	tRNA processing
M	0008266	molecular_function	poly(U) RNA binding
M	0008380	biological_process	RNA splicing
M	0022613	biological_process	ribonucleoprotein complex biogenesis
M	0030620	molecular_function	U2 snRNA binding
M	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
M	0120115	cellular_component	Lsm2-8 complex
M	1905323	biological_process	telomerase holoenzyme complex assembly
M	1990726	cellular_component	Lsm1-7-Pat1 complex
M	1990904	cellular_component	ribonucleoprotein complex
N	0000398	biological_process	mRNA splicing, via spliceosome
N	0000932	cellular_component	P-body
N	0003723	molecular_function	RNA binding
N	0005515	molecular_function	protein binding
N	0005634	cellular_component	nucleus
N	0005681	cellular_component	spliceosomal complex
N	0005682	cellular_component	U5 snRNP
N	0005686	cellular_component	U2 snRNP
N	0005688	cellular_component	U6 snRNP
N	0005697	cellular_component	telomerase holoenzyme complex
N	0005730	cellular_component	nucleolus
N	0005732	cellular_component	sno(s)RNA-containing ribonucleoprotein complex
N	0005737	cellular_component	cytoplasm
N	0006364	biological_process	rRNA processing
N	0006397	biological_process	mRNA processing
N	0008033	biological_process	tRNA processing
N	0008266	molecular_function	poly(U) RNA binding
N	0008380	biological_process	RNA splicing
N	0030490	biological_process	maturation of SSU-rRNA
N	0030620	molecular_function	U2 snRNA binding
N	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
N	0120114	cellular_component	Sm-like protein family complex
N	0120115	cellular_component	Lsm2-8 complex
N	1905323	biological_process	telomerase holoenzyme complex assembly
N	1990726	cellular_component	Lsm1-7-Pat1 complex
N	1990904	cellular_component	ribonucleoprotein complex
O	0000398	biological_process	mRNA splicing, via spliceosome
O	0000956	biological_process	nuclear-transcribed mRNA catabolic process
O	0003723	molecular_function	RNA binding
O	0005515	molecular_function	protein binding
O	0005634	cellular_component	nucleus
O	0005681	cellular_component	spliceosomal complex
O	0005682	cellular_component	U5 snRNP
O	0005686	cellular_component	U2 snRNP
O	0005688	cellular_component	U6 snRNP
O	0005697	cellular_component	telomerase holoenzyme complex
O	0005737	cellular_component	cytoplasm
O	0005829	cellular_component	cytosol
O	0006364	biological_process	rRNA processing
O	0006397	biological_process	mRNA processing
O	0008033	biological_process	tRNA processing
O	0008266	molecular_function	poly(U) RNA binding
O	0008380	biological_process	RNA splicing
O	0030620	molecular_function	U2 snRNA binding
O	0032991	cellular_component	protein-containing complex
O	0045292	biological_process	mRNA cis splicing, via spliceosome
O	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
O	0071004	cellular_component	U2-type prespliceosome
O	0071013	cellular_component	catalytic step 2 spliceosome
O	0097526	cellular_component	spliceosomal tri-snRNP complex
O	0120115	cellular_component	Lsm2-8 complex
O	1905323	biological_process	telomerase holoenzyme complex assembly
O	1990726	cellular_component	Lsm1-7-Pat1 complex
O	1990904	cellular_component	ribonucleoprotein complex
P	0000398	biological_process	mRNA splicing, via spliceosome
P	0003723	molecular_function	RNA binding
P	0003729	molecular_function	mRNA binding
P	0005515	molecular_function	protein binding
P	0005634	cellular_component	nucleus
P	0005681	cellular_component	spliceosomal complex
P	0005682	cellular_component	U5 snRNP
P	0005686	cellular_component	U2 snRNP
P	0005688	cellular_component	U6 snRNP
P	0005697	cellular_component	telomerase holoenzyme complex
P	0005737	cellular_component	cytoplasm
P	0006397	biological_process	mRNA processing
P	0008380	biological_process	RNA splicing
P	0030620	molecular_function	U2 snRNA binding
P	0032991	cellular_component	protein-containing complex
P	0034337	biological_process	RNA folding
P	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
P	0071011	cellular_component	precatalytic spliceosome
P	0120115	cellular_component	Lsm2-8 complex
P	0140691	molecular_function	RNA folding chaperone
P	1905323	biological_process	telomerase holoenzyme complex assembly
P	1990904	cellular_component	ribonucleoprotein complex

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	2
Details	MOD_RES: Phosphoserine => ECO:0000269|PubMed:18257517

Chain	Residue	Details
C	SER84
K	SER84

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