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6PH6

Ternary complex crystal structure of DNA polymerase Beta with 2nt-gap with dCTP bound downstream

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (Human)
2B
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164869.21Homo sapiens
3C
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*G)-3')polymer92771.81Homo sapiens
4D
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01Homo sapiens
5E
(A)
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATEnon-polymer467.21Chemie (DCP)
6F, G
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
7H, I
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
8J, K, L, M
(A, T, P, D)
waterwater18.073Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47418.7
Non-Polymers*Number of molecules5
Total formula weight561.7
All*Total formula weight47980.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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