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6P5I

Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1218S rRNApolymer1869602776.91Oryctolagus cuniculus (Rabbit)
2BuS2polymer29533003.11Oryctolagus cuniculus (Rabbit)
3CeS1polymer26430002.11UniProt (G1SS70)
Pfam (PF01015)
In PDB
Oryctolagus cuniculus (Rabbit)
4DuS5polymer25527485.21Oryctolagus cuniculus (Rabbit)
5EuS3polymer28131146.61UniProt (G1TNM3)
Pfam (PF07650)
Pfam (PF00189)
In PDB
Oryctolagus cuniculus (Rabbit)
6FeS4polymer26329658.91UniProt (G1TK17)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB
Oryctolagus cuniculus (Rabbit)
7GuS7polymer20422913.51UniProt (G1TFM5)
Pfam (PF00177)
In PDB
Oryctolagus cuniculus (Rabbit)
8HeS6polymer24928751.91UniProt (G1TM55)
Pfam (PF01092)
In PDB
Oryctolagus cuniculus (Rabbit)
9IeS7polymer19422168.91UniProt (G1SVB0)
Pfam (PF01251)
In PDB
Oryctolagus cuniculus (Rabbit)
10JeS8polymer20724134.21Oryctolagus cuniculus (Rabbit)
11KuS4polymer19422641.61UniProt (B7NZS8)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Oryctolagus cuniculus (Rabbit)
12LeS10polymer14917156.91UniProt (G1TPV3)
Pfam (PF03501)
In PDB
Oryctolagus cuniculus (Rabbit)
13MuS17polymer15818468.81UniProt (G1TRM4)
Pfam (PF16205)
Pfam (PF00366)
In PDB
Oryctolagus cuniculus (Rabbit)
14NeS12polymer13214539.01UniProt (G1SFR8)
Pfam (PF01248)
In PDB
Oryctolagus cuniculus (Rabbit)
15OuS15polymer15117259.41UniProt (G1SP51)
Pfam (PF08069)
Pfam (PF00312)
In PDB
Oryctolagus cuniculus (Rabbit)
16PuS11polymer15116302.81UniProt (G1U472)
Pfam (PF00411)
In PDB
Oryctolagus cuniculus (Rabbit)
17QuS19polymer14517049.21UniProt (G1U0Q2)
Pfam (PF00203)
In PDB
Oryctolagus cuniculus (Rabbit)
18RuS9polymer17219213.51UniProt (G1SGX4)
Pfam (PF00380)
In PDB
Oryctolagus cuniculus (Rabbit)
19SeS17polymer13515552.11UniProt (G1TU13)
Pfam (PF00833)
In PDB
Oryctolagus cuniculus (Rabbit)
20TuS13polymer15217759.81UniProt (G1TPG3)
Pfam (PF00416)
In PDB
Oryctolagus cuniculus (Rabbit)
21UeS19polymer14516235.81UniProt (G1TN62)
Pfam (PF01090)
In PDB
Oryctolagus cuniculus (Rabbit)
22VuS10polymer11913398.81UniProt (G1SIZ2)
Pfam (PF00338)
In PDB
Oryctolagus cuniculus (Rabbit)
23WeS21polymer839043.31UniProt (G1TM82)
Pfam (PF01249)
In PDB
Oryctolagus cuniculus (Rabbit)
24XuS8polymer13014865.61UniProt (G1TG89)
Pfam (PF00410)
In PDB
Oryctolagus cuniculus (Rabbit)
25YuS12polymer14315784.51UniProt (G1SZ47)
Pfam (PF00164)
In PDB
Oryctolagus cuniculus (Rabbit)
26ZeS24polymer13415548.41UniProt (G1T3D8)
Pfam (PF01282)
In PDB
Oryctolagus cuniculus (Rabbit)
27aeS25polymer12513776.21UniProt (G1TDB3)
Pfam (PF03297)
In PDB
Oryctolagus cuniculus (Rabbit)
28beS26polymer11512961.51UniProt (G1TFE8)
Pfam (PF01283)
In PDB
Oryctolagus cuniculus (Rabbit)
29ceS27polymer849480.21UniProt (G1TZ76)
Pfam (PF01667)
In PDB
Oryctolagus cuniculus (Rabbit)
30deS28polymer697855.11UniProt (G1TIB4)
Pfam (PF01200)
In PDB
Oryctolagus cuniculus (Rabbit)
31eeS29polymer566690.81UniProt (G1U7M4)
Pfam (PF00253)
In PDB
Oryctolagus cuniculus (Rabbit)
32feS30polymer13314498.91UniProt (G1T8A2)
Pfam (PF00240)
Pfam (PF04758)
In PDB
Oryctolagus cuniculus (Rabbit)
33geS31polymer15618004.01UniProt (G1SK22)
Pfam (PF00240)
Pfam (PF01599)
In PDB
Oryctolagus cuniculus (Rabbit)
34hRACK1polymer31735115.71UniProt (G1SJB4)
Pfam (PF00400)
In PDB
Oryctolagus cuniculus (Rabbit)
351IAPV-IRESpolymer25381572.11Israeli acute paralysis virus
36528S rRNApolymer35941164741.91Oryctolagus cuniculus (Rabbit)
3775S rRNApolymer11938385.81Oryctolagus cuniculus (Rabbit)
3885.8S rRNApolymer15650143.61Oryctolagus cuniculus (Rabbit)
39AAuL2polymer25728088.91UniProt (G1TT27)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Oryctolagus cuniculus (Rabbit)
40ABuL3polymer40346104.91UniProt (G1TL06)
Pfam (PF00297)
In PDB
Oryctolagus cuniculus (Rabbit)
41ACuL4polymer39244232.21UniProt (G1SVW5)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Oryctolagus cuniculus (Rabbit)
42ADuL18polymer29734479.81UniProt (G1SYJ6)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Oryctolagus cuniculus (Rabbit)
43AEeL6polymer29133028.31UniProt (G1SKF7)
Pfam (PF03868)
Pfam (PF01159)
In PDB
Oryctolagus cuniculus (Rabbit)
44AFuL30polymer24929514.31UniProt (G1SV32)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Oryctolagus cuniculus (Rabbit)
45AGeL8polymer24227655.81UniProt (G1STW0)
Pfam (PF01248)
In PDB
Oryctolagus cuniculus (Rabbit)
46AHuL6polymer19221871.41UniProt (G1TX33)
Pfam (PF00347)
UniProt (by SIFTS) (G1SWI6)
In PDB
Oryctolagus cuniculus (Rabbit)
47AIuL16polymer21424643.11UniProt (B7NZQ2)
Pfam (PF00252)
In PDB
Oryctolagus cuniculus (Rabbit)
48AJuL11polymer17820288.51UniProt (G1TUB8)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Oryctolagus cuniculus (Rabbit)
49ALeL13polymer21124331.71Oryctolagus cuniculus (Rabbit)
50AML14epolymer19821950.31UniProt (U3KNW6)
Pfam (PF01929)
In PDB
Oryctolagus cuniculus (Rabbit)
51ANeL15polymer20424207.31UniProt (G1T0C1)
Pfam (PF00827)
In PDB
Oryctolagus cuniculus (Rabbit)
52AOuL13polymer20323547.31Oryctolagus cuniculus (Rabbit)
53APuL22polymer18421444.21UniProt (G1TVT6)
Pfam (PF00237)
In PDB
Oryctolagus cuniculus (Rabbit)
54AQeL18polymer18821821.71Oryctolagus cuniculus (Rabbit)
55AReL19polymer19623480.21UniProt (G1TJR3)
Pfam (PF01280)
In PDB
Oryctolagus cuniculus (Rabbit)
56ASeL20polymer17620743.41Oryctolagus cuniculus (Rabbit)
57ATeL21polymer16018610.01UniProt (G1SHQ2)
Pfam (PF01157)
In PDB
Oryctolagus cuniculus (Rabbit)
58AUeL22polymer12814936.11UniProt (G1TSG1)
Pfam (PF01776)
In PDB
Oryctolagus cuniculus (Rabbit)
59AVuL14polymer14014892.51UniProt (G1T6D1)
Pfam (PF00238)
In PDB
Oryctolagus cuniculus (Rabbit)
60AWeL24polymer15717825.11UniProt (G1SE28)
Pfam (PF01246)
In PDB
Oryctolagus cuniculus (Rabbit)
61AXeL23polymer15617768.21UniProt (G1SE76)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Oryctolagus cuniculus (Rabbit)
62AYuL24polymer14517303.41UniProt (G1SQH0)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Oryctolagus cuniculus (Rabbit)
63AZeL27polymer13615835.81UniProt (G1TXF6)
Pfam (PF00467)
Pfam (PF01777)
In PDB
Oryctolagus cuniculus (Rabbit)
64AauL15polymer14816617.51UniProt (G1SNY0)
Pfam (PF00828)
In PDB
Oryctolagus cuniculus (Rabbit)
65AbeL29polymer22624931.61UniProt (G1SGR6)
Pfam (PF01779)
In PDB
Oryctolagus cuniculus (Rabbit)
66AceL30polymer11512807.11UniProt (G1TDL2)
Pfam (PF01248)
In PDB
Oryctolagus cuniculus (Rabbit)
67AdeL31polymer12514494.91UniProt (G1SHG0)
Pfam (PF01198)
In PDB
Oryctolagus cuniculus (Rabbit)
68AeeL32polymer13515898.91UniProt (G1U437)
Pfam (PF01655)
In PDB
Oryctolagus cuniculus (Rabbit)
69AfeL33polymer11012580.81UniProt (G1SF08)
Pfam (PF01247)
In PDB
Oryctolagus cuniculus (Rabbit)
70AgeL34polymer12614210.11UniProt (G1U945)
Pfam (PF01199)
In PDB
Oryctolagus cuniculus (Rabbit)
71AheL35polymer12314566.61UniProt (G1SIT5)
Pfam (PF00831)
In PDB
Oryctolagus cuniculus (Rabbit)
72AieL36polymer10512263.81UniProt (G1TTQ5)
Pfam (PF01158)
In PDB
Oryctolagus cuniculus (Rabbit)
73AjeL37polymer9711111.01UniProt (U3KPD5)
Pfam (PF01907)
In PDB
Oryctolagus cuniculus (Rabbit)
74AkeL38polymer698140.81Oryctolagus cuniculus (Rabbit)
75AleL39polymer516455.81UniProt (G1TTN1)
Pfam (PF00832)
In PDB
Oryctolagus cuniculus (Rabbit)
76AmeL40polymer526199.61Oryctolagus cuniculus (Rabbit)
77AneL41polymer253473.51UniProt (A0A087WNH4)
Pfam (PF05162)
In PDB
Oryctolagus cuniculus (Rabbit)
78AoeL42polymer10612477.01UniProt (G1U344)
Pfam (PF00935)
In PDB
Oryctolagus cuniculus (Rabbit)
79ApeL43polymer9210299.41UniProt (G1SY53)
Pfam (PF01780)
In PDB
Oryctolagus cuniculus (Rabbit)
80AreL28polymer13715783.61UniProt (G1U7L1)
Pfam (PF01778)
In PDB
Oryctolagus cuniculus (Rabbit)
81AKuL1polymer21724879.41UniProt (G1SKZ8)
Pfam (PF00687)
In PDB
Oryctolagus cuniculus (Rabbit)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains81
Total formula weight3411882.1
All*Total formula weight3411882.1
*Water molecules are not included.

218500

PDB entries from 2024-04-17

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