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6P5I

Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
AA0003723molecular_functionRNA binding
AA0003735molecular_functionstructural constituent of ribosome
AA0005840cellular_componentribosome
AA0006412biological_processtranslation
AA0015934cellular_componentlarge ribosomal subunit
AB0003723molecular_functionRNA binding
AB0003735molecular_functionstructural constituent of ribosome
AB0005634cellular_componentnucleus
AB0005730cellular_componentnucleolus
AB0005737cellular_componentcytoplasm
AB0005840cellular_componentribosome
AB0006412biological_processtranslation
AB0022625cellular_componentcytosolic large ribosomal subunit
AB1990904cellular_componentribonucleoprotein complex
AC0003723molecular_functionRNA binding
AC0003735molecular_functionstructural constituent of ribosome
AC0005737cellular_componentcytoplasm
AC0005840cellular_componentribosome
AC0006412biological_processtranslation
AC0022625cellular_componentcytosolic large ribosomal subunit
AC1990904cellular_componentribonucleoprotein complex
AD0003735molecular_functionstructural constituent of ribosome
AD0005840cellular_componentribosome
AD0006412biological_processtranslation
AD0008097molecular_function5S rRNA binding
AE0002181biological_processcytoplasmic translation
AE0003723molecular_functionRNA binding
AE0003735molecular_functionstructural constituent of ribosome
AE0005737cellular_componentcytoplasm
AE0005783cellular_componentendoplasmic reticulum
AE0005791cellular_componentrough endoplasmic reticulum
AE0005829cellular_componentcytosol
AE0005840cellular_componentribosome
AE0006412biological_processtranslation
AE0022625cellular_componentcytosolic large ribosomal subunit
AE1990904cellular_componentribonucleoprotein complex
AF0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AF0003735molecular_functionstructural constituent of ribosome
AF0022625cellular_componentcytosolic large ribosomal subunit
AH0002181biological_processcytoplasmic translation
AH0003735molecular_functionstructural constituent of ribosome
AH0005737cellular_componentcytoplasm
AH0005840cellular_componentribosome
AH0006412biological_processtranslation
AH0019843molecular_functionrRNA binding
AH0022625cellular_componentcytosolic large ribosomal subunit
AH1990904cellular_componentribonucleoprotein complex
AI0003735molecular_functionstructural constituent of ribosome
AI0005737cellular_componentcytoplasm
AI0005840cellular_componentribosome
AI0006412biological_processtranslation
AI0006417biological_processregulation of translation
AI0022625cellular_componentcytosolic large ribosomal subunit
AI1990904cellular_componentribonucleoprotein complex
AJ0003723molecular_functionRNA binding
AJ0003735molecular_functionstructural constituent of ribosome
AJ0005634cellular_componentnucleus
AJ0005730cellular_componentnucleolus
AJ0005737cellular_componentcytoplasm
AJ0005840cellular_componentribosome
AJ0006412biological_processtranslation
AJ0019843molecular_functionrRNA binding
AJ0022625cellular_componentcytosolic large ribosomal subunit
AJ1990904cellular_componentribonucleoprotein complex
AK0000470biological_processmaturation of LSU-rRNA
AK0003723molecular_functionRNA binding
AK0003735molecular_functionstructural constituent of ribosome
AK0005737cellular_componentcytoplasm
AK0005840cellular_componentribosome
AK0006412biological_processtranslation
AK0015934cellular_componentlarge ribosomal subunit
AK0022625cellular_componentcytosolic large ribosomal subunit
AK1990904cellular_componentribonucleoprotein complex
AL0003735molecular_functionstructural constituent of ribosome
AL0005840cellular_componentribosome
AL0006412biological_processtranslation
AM0003723molecular_functionRNA binding
AM0003735molecular_functionstructural constituent of ribosome
AM0005840cellular_componentribosome
AM0006412biological_processtranslation
AN0002181biological_processcytoplasmic translation
AN0003723molecular_functionRNA binding
AN0003735molecular_functionstructural constituent of ribosome
AN0005737cellular_componentcytoplasm
AN0005840cellular_componentribosome
AN0006412biological_processtranslation
AN0022625cellular_componentcytosolic large ribosomal subunit
AN0022626cellular_componentcytosolic ribosome
AN0044391cellular_componentribosomal subunit
AN1990904cellular_componentribonucleoprotein complex
AO0003735molecular_functionstructural constituent of ribosome
AO0005840cellular_componentribosome
AO0006412biological_processtranslation
AO0015934cellular_componentlarge ribosomal subunit
AP0003735molecular_functionstructural constituent of ribosome
AP0005840cellular_componentribosome
AP0006412biological_processtranslation
AP0015934cellular_componentlarge ribosomal subunit
AQ0003735molecular_functionstructural constituent of ribosome
AQ0005840cellular_componentribosome
AQ0006412biological_processtranslation
AR0003723molecular_functionRNA binding
AR0003735molecular_functionstructural constituent of ribosome
AR0005840cellular_componentribosome
AR0006412biological_processtranslation
AR0022625cellular_componentcytosolic large ribosomal subunit
AR1990904cellular_componentribonucleoprotein complex
AS0003735molecular_functionstructural constituent of ribosome
AS0005840cellular_componentribosome
AS0006412biological_processtranslation
AT0003735molecular_functionstructural constituent of ribosome
AT0005737cellular_componentcytoplasm
AT0005783cellular_componentendoplasmic reticulum
AT0005829cellular_componentcytosol
AT0005840cellular_componentribosome
AT0006412biological_processtranslation
AT0022625cellular_componentcytosolic large ribosomal subunit
AT1990904cellular_componentribonucleoprotein complex
AU0002181biological_processcytoplasmic translation
AU0003723molecular_functionRNA binding
AU0003735molecular_functionstructural constituent of ribosome
AU0005737cellular_componentcytoplasm
AU0005840cellular_componentribosome
AU0006412biological_processtranslation
AU0008201molecular_functionheparin binding
AU1990904cellular_componentribonucleoprotein complex
AV0000122biological_processnegative regulation of transcription by RNA polymerase II
AV0001223molecular_functiontranscription coactivator binding
AV0003735molecular_functionstructural constituent of ribosome
AV0005654cellular_componentnucleoplasm
AV0005730cellular_componentnucleolus
AV0005737cellular_componentcytoplasm
AV0005840cellular_componentribosome
AV0006412biological_processtranslation
AV0008284biological_processpositive regulation of cell population proliferation
AV0010628biological_processpositive regulation of gene expression
AV0022625cellular_componentcytosolic large ribosomal subunit
AV0022626cellular_componentcytosolic ribosome
AV0031625molecular_functionubiquitin protein ligase binding
AV0032986biological_processprotein-DNA complex disassembly
AV0032991cellular_componentprotein-containing complex
AV0045202cellular_componentsynapse
AV0050821biological_processprotein stabilization
AV0070180molecular_functionlarge ribosomal subunit rRNA binding
AV0070314biological_processG1 to G0 transition
AV0072717biological_processcellular response to actinomycin D
AV1901798biological_processpositive regulation of signal transduction by p53 class mediator
AV1903450biological_processregulation of G1 to G0 transition
AV1990904cellular_componentribonucleoprotein complex
AV1990948molecular_functionubiquitin ligase inhibitor activity
AV2000059biological_processnegative regulation of ubiquitin-dependent protein catabolic process
AW0002181biological_processcytoplasmic translation
AW0003729molecular_functionmRNA binding
AW0003735molecular_functionstructural constituent of ribosome
AW0005737cellular_componentcytoplasm
AW0005783cellular_componentendoplasmic reticulum
AW0005829cellular_componentcytosol
AW0005840cellular_componentribosome
AW0006412biological_processtranslation
AW0010458biological_processexit from mitosis
AW0021554biological_processoptic nerve development
AW0022625cellular_componentcytosolic large ribosomal subunit
AW0022626cellular_componentcytosolic ribosome
AW0031290biological_processretinal ganglion cell axon guidance
AW0045202cellular_componentsynapse
AW0060041biological_processretina development in camera-type eye
AW1990904cellular_componentribonucleoprotein complex
AX0003723molecular_functionRNA binding
AX0003735molecular_functionstructural constituent of ribosome
AX0005634cellular_componentnucleus
AX0005737cellular_componentcytoplasm
AX0005840cellular_componentribosome
AX0006412biological_processtranslation
AX0019843molecular_functionrRNA binding
AX0022625cellular_componentcytosolic large ribosomal subunit
AX1990904cellular_componentribonucleoprotein complex
AY0002181biological_processcytoplasmic translation
AY0003723molecular_functionRNA binding
AY0003735molecular_functionstructural constituent of ribosome
AY0005654cellular_componentnucleoplasm
AY0005730cellular_componentnucleolus
AY0005737cellular_componentcytoplasm
AY0005840cellular_componentribosome
AY0006364biological_processrRNA processing
AY0006412biological_processtranslation
AY0006977biological_processDNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
AY0015934cellular_componentlarge ribosomal subunit
AY0022625cellular_componentcytosolic large ribosomal subunit
AY0022626cellular_componentcytosolic ribosome
AY0034644biological_processcellular response to UV
AY0042273biological_processribosomal large subunit biogenesis
AY0045202cellular_componentsynapse
AY0045727biological_processpositive regulation of translation
AY0048027molecular_functionmRNA 5'-UTR binding
AY0071479biological_processcellular response to ionizing radiation
AY0071480biological_processcellular response to gamma radiation
AY1902164biological_processpositive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
AY1902167biological_processpositive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
AY1904803biological_processregulation of translation involved in cellular response to UV
AY1990904cellular_componentribonucleoprotein complex
AZ0003735molecular_functionstructural constituent of ribosome
AZ0005654cellular_componentnucleoplasm
AZ0005730cellular_componentnucleolus
AZ0005737cellular_componentcytoplasm
AZ0005783cellular_componentendoplasmic reticulum
AZ0005791cellular_componentrough endoplasmic reticulum
AZ0005829cellular_componentcytosol
AZ0005840cellular_componentribosome
AZ0006364biological_processrRNA processing
AZ0006412biological_processtranslation
AZ0022625cellular_componentcytosolic large ribosomal subunit
AZ0022626cellular_componentcytosolic ribosome
AZ1990904cellular_componentribonucleoprotein complex
Aa0003735molecular_functionstructural constituent of ribosome
Aa0005737cellular_componentcytoplasm
Aa0005840cellular_componentribosome
Aa0006412biological_processtranslation
Aa0015934cellular_componentlarge ribosomal subunit
Aa0022625cellular_componentcytosolic large ribosomal subunit
Aa0043232cellular_componentintracellular non-membrane-bounded organelle
Aa1990904cellular_componentribonucleoprotein complex
Ab0002181biological_processcytoplasmic translation
Ab0003735molecular_functionstructural constituent of ribosome
Ab0005737cellular_componentcytoplasm
Ab0005840cellular_componentribosome
Ab0006412biological_processtranslation
Ab0022625cellular_componentcytosolic large ribosomal subunit
Ab1990904cellular_componentribonucleoprotein complex
Ac0002181biological_processcytoplasmic translation
Ac0003723molecular_functionRNA binding
Ac0003735molecular_functionstructural constituent of ribosome
Ac0005634cellular_componentnucleus
Ac0005737cellular_componentcytoplasm
Ac0005840cellular_componentribosome
Ac0014069cellular_componentpostsynaptic density
Ac0022625cellular_componentcytosolic large ribosomal subunit
Ac0022626cellular_componentcytosolic ribosome
Ac0031640biological_processkilling of cells of another organism
Ac0045202cellular_componentsynapse
Ac0050829biological_processdefense response to Gram-negative bacterium
Ac0061844biological_processantimicrobial humoral immune response mediated by antimicrobial peptide
Ac1990904cellular_componentribonucleoprotein complex
Ad0002181biological_processcytoplasmic translation
Ad0003735molecular_functionstructural constituent of ribosome
Ad0005737cellular_componentcytoplasm
Ad0005840cellular_componentribosome
Ad0006412biological_processtranslation
Ad0022625cellular_componentcytosolic large ribosomal subunit
Ad1990904cellular_componentribonucleoprotein complex
Ae0003735molecular_functionstructural constituent of ribosome
Ae0005840cellular_componentribosome
Ae0006412biological_processtranslation
Af0000049molecular_functiontRNA binding
Af0002181biological_processcytoplasmic translation
Af0003723molecular_functionRNA binding
Af0003735molecular_functionstructural constituent of ribosome
Af0005737cellular_componentcytoplasm
Af0005840cellular_componentribosome
Af0006412biological_processtranslation
Af0022625cellular_componentcytosolic large ribosomal subunit
Af0042273biological_processribosomal large subunit biogenesis
Af1990904cellular_componentribonucleoprotein complex
Ag0003735molecular_functionstructural constituent of ribosome
Ag0005840cellular_componentribosome
Ag0006412biological_processtranslation
Ah0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Ah0003729molecular_functionmRNA binding
Ah0003735molecular_functionstructural constituent of ribosome
Ah0005737cellular_componentcytoplasm
Ah0005840cellular_componentribosome
Ah0006412biological_processtranslation
Ah0022625cellular_componentcytosolic large ribosomal subunit
Ah1990904cellular_componentribonucleoprotein complex
Ai0003735molecular_functionstructural constituent of ribosome
Ai0005840cellular_componentribosome
Ai0006412biological_processtranslation
Aj0003723molecular_functionRNA binding
Aj0003735molecular_functionstructural constituent of ribosome
Aj0005737cellular_componentcytoplasm
Aj0005840cellular_componentribosome
Aj0006412biological_processtranslation
Aj0019843molecular_functionrRNA binding
Aj0022625cellular_componentcytosolic large ribosomal subunit
Aj0046872molecular_functionmetal ion binding
Aj1990904cellular_componentribonucleoprotein complex
Ak0003735molecular_functionstructural constituent of ribosome
Ak0005840cellular_componentribosome
Ak0006412biological_processtranslation
Al0003735molecular_functionstructural constituent of ribosome
Al0005840cellular_componentribosome
Al0006412biological_processtranslation
Al0022625cellular_componentcytosolic large ribosomal subunit
Al1990904cellular_componentribonucleoprotein complex
Am0003735molecular_functionstructural constituent of ribosome
Am0005840cellular_componentribosome
Am0006412biological_processtranslation
An0003735molecular_functionstructural constituent of ribosome
An0005737cellular_componentcytoplasm
An0005840cellular_componentribosome
An0006412biological_processtranslation
An1990904cellular_componentribonucleoprotein complex
Ao0003735molecular_functionstructural constituent of ribosome
Ao0005840cellular_componentribosome
Ao0006412biological_processtranslation
Ap0003735molecular_functionstructural constituent of ribosome
Ap0005737cellular_componentcytoplasm
Ap0005840cellular_componentribosome
Ap0006412biological_processtranslation
Ap0022625cellular_componentcytosolic large ribosomal subunit
Ap0046872molecular_functionmetal ion binding
Ap1990904cellular_componentribonucleoprotein complex
Ar0003735molecular_functionstructural constituent of ribosome
Ar0005737cellular_componentcytoplasm
Ar0005840cellular_componentribosome
Ar0006412biological_processtranslation
Ar0022625cellular_componentcytosolic large ribosomal subunit
Ar1990904cellular_componentribonucleoprotein complex
B0003735molecular_functionstructural constituent of ribosome
B0005055molecular_functionlaminin receptor activity
B0005840cellular_componentribosome
B0006412biological_processtranslation
B0015935cellular_componentsmall ribosomal subunit
C0003735molecular_functionstructural constituent of ribosome
C0005634cellular_componentnucleus
C0005730cellular_componentnucleolus
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005840cellular_componentribosome
C0006412biological_processtranslation
C0022627cellular_componentcytosolic small ribosomal subunit
C0030154biological_processcell differentiation
C1990904cellular_componentribonucleoprotein complex
D0003723molecular_functionRNA binding
D0003735molecular_functionstructural constituent of ribosome
D0005840cellular_componentribosome
D0006412biological_processtranslation
D0015935cellular_componentsmall ribosomal subunit
E0003723molecular_functionRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0006412biological_processtranslation
E0015935cellular_componentsmall ribosomal subunit
F0003723molecular_functionRNA binding
F0003735molecular_functionstructural constituent of ribosome
F0005634cellular_componentnucleus
F0005730cellular_componentnucleolus
F0005737cellular_componentcytoplasm
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0019843molecular_functionrRNA binding
F0022626cellular_componentcytosolic ribosome
F0022627cellular_componentcytosolic small ribosomal subunit
F1990904cellular_componentribonucleoprotein complex
G0000028biological_processribosomal small subunit assembly
G0003723molecular_functionRNA binding
G0003729molecular_functionmRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0005634cellular_componentnucleus
G0005730cellular_componentnucleolus
G0005737cellular_componentcytoplasm
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0015935cellular_componentsmall ribosomal subunit
G0019843molecular_functionrRNA binding
G0022626cellular_componentcytosolic ribosome
G0022627cellular_componentcytosolic small ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
H0003735molecular_functionstructural constituent of ribosome
H0005840cellular_componentribosome
H0006412biological_processtranslation
I0003735molecular_functionstructural constituent of ribosome
I0005634cellular_componentnucleus
I0005730cellular_componentnucleolus
I0005737cellular_componentcytoplasm
I0005813cellular_componentcentrosome
I0005840cellular_componentribosome
I0005856cellular_componentcytoskeleton
I0006364biological_processrRNA processing
I0006412biological_processtranslation
I0022626cellular_componentcytosolic ribosome
I0022627cellular_componentcytosolic small ribosomal subunit
I0030686cellular_component90S preribosome
I0032040cellular_componentsmall-subunit processome
I0042274biological_processribosomal small subunit biogenesis
I1990904cellular_componentribonucleoprotein complex
J0003735molecular_functionstructural constituent of ribosome
J0005840cellular_componentribosome
J0006412biological_processtranslation
K0003723molecular_functionRNA binding
K0003735molecular_functionstructural constituent of ribosome
K0005634cellular_componentnucleus
K0005730cellular_componentnucleolus
K0005737cellular_componentcytoplasm
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0015935cellular_componentsmall ribosomal subunit
K0019843molecular_functionrRNA binding
K0022626cellular_componentcytosolic ribosome
K0022627cellular_componentcytosolic small ribosomal subunit
K0042274biological_processribosomal small subunit biogenesis
K0043226cellular_componentorganelle
K1990904cellular_componentribonucleoprotein complex
L0003723molecular_functionRNA binding
L0003735molecular_functionstructural constituent of ribosome
L0022627cellular_componentcytosolic small ribosomal subunit
M0003723molecular_functionRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0005634cellular_componentnucleus
M0005730cellular_componentnucleolus
M0005737cellular_componentcytoplasm
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0019843molecular_functionrRNA binding
M0022626cellular_componentcytosolic ribosome
M0022627cellular_componentcytosolic small ribosomal subunit
M1990904cellular_componentribonucleoprotein complex
N0003735molecular_functionstructural constituent of ribosome
N0005634cellular_componentnucleus
N0005730cellular_componentnucleolus
N0005737cellular_componentcytoplasm
N0005794cellular_componentGolgi apparatus
N0005829cellular_componentcytosol
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0022626cellular_componentcytosolic ribosome
N0022627cellular_componentcytosolic small ribosomal subunit
N0032040cellular_componentsmall-subunit processome
N0042274biological_processribosomal small subunit biogenesis
N0043231cellular_componentintracellular membrane-bounded organelle
N0090263biological_processpositive regulation of canonical Wnt signaling pathway
N1990904cellular_componentribonucleoprotein complex
O0003735molecular_functionstructural constituent of ribosome
O0005634cellular_componentnucleus
O0005730cellular_componentnucleolus
O0005737cellular_componentcytoplasm
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0022626cellular_componentcytosolic ribosome
O0022627cellular_componentcytosolic small ribosomal subunit
O0070181molecular_functionsmall ribosomal subunit rRNA binding
O1990904cellular_componentribonucleoprotein complex
P0003735molecular_functionstructural constituent of ribosome
P0005840cellular_componentribosome
P0006412biological_processtranslation
Q0000028biological_processribosomal small subunit assembly
Q0000056biological_processribosomal small subunit export from nucleus
Q0003723molecular_functionRNA binding
Q0003735molecular_functionstructural constituent of ribosome
Q0005737cellular_componentcytoplasm
Q0005840cellular_componentribosome
Q0006364biological_processrRNA processing
Q0006412biological_processtranslation
Q0015935cellular_componentsmall ribosomal subunit
Q0022626cellular_componentcytosolic ribosome
Q0022627cellular_componentcytosolic small ribosomal subunit
Q0042274biological_processribosomal small subunit biogenesis
Q0097371molecular_functionMDM2/MDM4 family protein binding
Q1901798biological_processpositive regulation of signal transduction by p53 class mediator
Q1990904cellular_componentribonucleoprotein complex
Q1990948molecular_functionubiquitin ligase inhibitor activity
R0003735molecular_functionstructural constituent of ribosome
R0005840cellular_componentribosome
R0006412biological_processtranslation
S0003735molecular_functionstructural constituent of ribosome
S0005634cellular_componentnucleus
S0005730cellular_componentnucleolus
S0005737cellular_componentcytoplasm
S0005829cellular_componentcytosol
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0022626cellular_componentcytosolic ribosome
S1990904cellular_componentribonucleoprotein complex
T0003676molecular_functionnucleic acid binding
T0003723molecular_functionRNA binding
T0003735molecular_functionstructural constituent of ribosome
T0005737cellular_componentcytoplasm
T0005829cellular_componentcytosol
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0015935cellular_componentsmall ribosomal subunit
T0019843molecular_functionrRNA binding
T0022626cellular_componentcytosolic ribosome
T1990904cellular_componentribonucleoprotein complex
U0000028biological_processribosomal small subunit assembly
U0003723molecular_functionRNA binding
U0003735molecular_functionstructural constituent of ribosome
U0005634cellular_componentnucleus
U0005730cellular_componentnucleolus
U0005737cellular_componentcytoplasm
U0005840cellular_componentribosome
U0006412biological_processtranslation
U0022626cellular_componentcytosolic ribosome
U0022627cellular_componentcytosolic small ribosomal subunit
U1990904cellular_componentribonucleoprotein complex
V0003723molecular_functionRNA binding
V0003735molecular_functionstructural constituent of ribosome
V0005737cellular_componentcytoplasm
V0005840cellular_componentribosome
V0006412biological_processtranslation
V0015935cellular_componentsmall ribosomal subunit
V0022626cellular_componentcytosolic ribosome
V0022627cellular_componentcytosolic small ribosomal subunit
V1990904cellular_componentribonucleoprotein complex
W0003735molecular_functionstructural constituent of ribosome
W0005840cellular_componentribosome
W0006412biological_processtranslation
X0003735molecular_functionstructural constituent of ribosome
X0005634cellular_componentnucleus
X0005730cellular_componentnucleolus
X0005737cellular_componentcytoplasm
X0005840cellular_componentribosome
X0006412biological_processtranslation
X0022626cellular_componentcytosolic ribosome
X0022627cellular_componentcytosolic small ribosomal subunit
X1990904cellular_componentribonucleoprotein complex
Y0003735molecular_functionstructural constituent of ribosome
Y0005634cellular_componentnucleus
Y0005730cellular_componentnucleolus
Y0005737cellular_componentcytoplasm
Y0005783cellular_componentendoplasmic reticulum
Y0005791cellular_componentrough endoplasmic reticulum
Y0005829cellular_componentcytosol
Y0005840cellular_componentribosome
Y0006412biological_processtranslation
Y0015935cellular_componentsmall ribosomal subunit
Y0022626cellular_componentcytosolic ribosome
Y0022627cellular_componentcytosolic small ribosomal subunit
Y1990904cellular_componentribonucleoprotein complex
Z0003735molecular_functionstructural constituent of ribosome
Z0005840cellular_componentribosome
Z0006412biological_processtranslation
Z0044391cellular_componentribosomal subunit
Z1990904cellular_componentribonucleoprotein complex
a0003735molecular_functionstructural constituent of ribosome
a0005634cellular_componentnucleus
a0005730cellular_componentnucleolus
a0005737cellular_componentcytoplasm
a0005840cellular_componentribosome
a0006364biological_processrRNA processing
a0014069cellular_componentpostsynaptic density
a0022626cellular_componentcytosolic ribosome
a0022627cellular_componentcytosolic small ribosomal subunit
a0042274biological_processribosomal small subunit biogenesis
a0045202cellular_componentsynapse
a1990904cellular_componentribonucleoprotein complex
b0003729molecular_functionmRNA binding
b0003735molecular_functionstructural constituent of ribosome
b0005737cellular_componentcytoplasm
b0005783cellular_componentendoplasmic reticulum
b0005791cellular_componentrough endoplasmic reticulum
b0005829cellular_componentcytosol
b0005840cellular_componentribosome
b0006412biological_processtranslation
b0022626cellular_componentcytosolic ribosome
b0022627cellular_componentcytosolic small ribosomal subunit
b1990904cellular_componentribonucleoprotein complex
c0000028biological_processribosomal small subunit assembly
c0003723molecular_functionRNA binding
c0003735molecular_functionstructural constituent of ribosome
c0005634cellular_componentnucleus
c0005730cellular_componentnucleolus
c0005737cellular_componentcytoplasm
c0005829cellular_componentcytosol
c0005840cellular_componentribosome
c0006412biological_processtranslation
c0022626cellular_componentcytosolic ribosome
c0022627cellular_componentcytosolic small ribosomal subunit
c0046872molecular_functionmetal ion binding
c1990904cellular_componentribonucleoprotein complex
d0000028biological_processribosomal small subunit assembly
d0002181biological_processcytoplasmic translation
d0003735molecular_functionstructural constituent of ribosome
d0005634cellular_componentnucleus
d0005730cellular_componentnucleolus
d0005737cellular_componentcytoplasm
d0005783cellular_componentendoplasmic reticulum
d0005791cellular_componentrough endoplasmic reticulum
d0005829cellular_componentcytosol
d0005840cellular_componentribosome
d0006364biological_processrRNA processing
d0006412biological_processtranslation
d0022626cellular_componentcytosolic ribosome
d0022627cellular_componentcytosolic small ribosomal subunit
d0030490biological_processmaturation of SSU-rRNA
d0032040cellular_componentsmall-subunit processome
d0042254biological_processribosome biogenesis
d0042274biological_processribosomal small subunit biogenesis
d0045202cellular_componentsynapse
d1990904cellular_componentribonucleoprotein complex
e0003735molecular_functionstructural constituent of ribosome
e0005737cellular_componentcytoplasm
e0005783cellular_componentendoplasmic reticulum
e0005791cellular_componentrough endoplasmic reticulum
e0005829cellular_componentcytosol
e0005840cellular_componentribosome
e0006412biological_processtranslation
e0008270molecular_functionzinc ion binding
e0022626cellular_componentcytosolic ribosome
e0022627cellular_componentcytosolic small ribosomal subunit
e0046872molecular_functionmetal ion binding
e1990904cellular_componentribonucleoprotein complex
f0003735molecular_functionstructural constituent of ribosome
f0005634cellular_componentnucleus
f0005737cellular_componentcytoplasm
f0005829cellular_componentcytosol
f0005840cellular_componentribosome
f0006412biological_processtranslation
f0022627cellular_componentcytosolic small ribosomal subunit
f1990904cellular_componentribonucleoprotein complex
g0003735molecular_functionstructural constituent of ribosome
g0005840cellular_componentribosome
g0006412biological_processtranslation
h0001891cellular_componentphagocytic cup
h0001934biological_processpositive regulation of protein phosphorylation
h0005080molecular_functionprotein kinase C binding
h0005634cellular_componentnucleus
h0005737cellular_componentcytoplasm
h0005829cellular_componentcytosol
h0005840cellular_componentribosome
h0005886cellular_componentplasma membrane
h0006417biological_processregulation of translation
h0006915biological_processapoptotic process
h0007049biological_processcell cycle
h0007369biological_processgastrulation
h0016020cellular_componentmembrane
h0030425cellular_componentdendrite
h0042995cellular_componentcell projection
h0043022molecular_functionribosome binding
h0043204cellular_componentperikaryon
h0045182molecular_functiontranslation regulator activity
h0048471cellular_componentperinuclear region of cytoplasm
h0048511biological_processrhythmic process
h0072344biological_processrescue of stalled ribosome
h1990904cellular_componentribonucleoprotein complex
Functional Information from PROSITE/UniProt
site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
ChainResidueDetails
YLYS60-ARG67

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLrQifNgTfvklnkasinMLriVepYI
ChainResidueDetails
AFVAL107-ILE139

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsnrhglirkyg.LNMCRqCFR
ChainResidueDetails
eARG22-ARG44

site_idPS00712
Number of Residues16
DetailsRIBOSOMAL_S17E Ribosomal protein S17e signature. IpSKkLRNkIAGYvTH
ChainResidueDetails
SILE41-HIS56

site_idPS00709
Number of Residues25
DetailsRIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkyvlGyKqsLKmiRqGkaKlVIL
ChainResidueDetails
AcSER24-LEU48

site_idPS00993
Number of Residues21
DetailsRIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTacGKyyrvctLsIiDpG
ChainResidueDetails
AcGLU80-GLY100

site_idPS01257
Number of Residues22
DetailsRIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqtGMRgAFGKPqGtvARV
ChainResidueDetails
AIALA108-VAL129

site_idPS01105
Number of Residues22
DetailsRIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRaHGnsGmVrAkFrsnLP
ChainResidueDetails
AfGLY72-PRO93

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. NGKtfnqveIkpemIGhyLGEFsiT
ChainResidueDetails
QASN98-THR122

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVFKlglAkSihhARvLI
ChainResidueDetails
KLEU106-ILE130

site_idPS01194
Number of Residues24
DetailsRIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGYVIYRiRVrRG
ChainResidueDetails
ANASP46-GLY69

site_idPS00996
Number of Residues9
DetailsRIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA
ChainResidueDetails
WLEU11-ALA19

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgEcRPLS
ChainResidueDetails
MGLY123-SER135

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. AkekNLkvkGPVrMPT
ChainResidueDetails
VALA43-THR58

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinpymsspCHIEMiL
ChainResidueDetails
APARG126-LEU150

site_idPS01073
Number of Residues18
DetailsRIBOSOMAL_L24E Ribosomal protein L24e signature. FsGykIyPGhGrrYaRtD
ChainResidueDetails
AWPHE8-ASP25

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHfwGlrVRGQ
ChainResidueDetails
TARG121-GLN134

site_idPS00578
Number of Residues12
DetailsRIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM
ChainResidueDetails
HILE52-MET63

site_idPS01144
Number of Residues15
DetailsRIBOSOMAL_L31E Ribosomal protein L31e signature. VRIDtrLNkAvWaKG
ChainResidueDetails
AdVAL62-GLY76

site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVIrqrksyrrk.DGvflyFedNagVI
ChainResidueDetails
AVALA79-ILE105

site_idPS01108
Number of Residues19
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVqVVrGhyKGqqiGkV
ChainResidueDetails
AYASP52-VAL70

site_idPS00526
Number of Residues20
DetailsRIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaSsvlrCGkkkVWLDP
ChainResidueDetails
ARGLN7-PRO26

site_idPS00687
Number of Residues8
DetailsALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. GESSGKNV
ChainResidueDetails
ACGLY15-VAL22

site_idPS00939
Number of Residues27
DetailsRIBOSOMAL_L1E Ribosomal protein L1e signature. NttqKryAIcSALaASAlpalvmsKGH
ChainResidueDetails
ACASN116-HIS142

site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
ChainResidueDetails
dGLU60-LEU68

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GfiVLTTSaGIMdheeAR
ChainResidueDetails
XGLY100-ARG117

site_idPS01106
Number of Residues18
DetailsRIBOSOMAL_L18E Ribosomal protein L18e signature. KrLfmSRtkRPpLSLsRV
ChainResidueDetails
AQLYS49-VAL66

site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVfEvSLaDL
ChainResidueDetails
CLEU62-LEU74

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsMMmhgrnnGKKlmtvrIVkhA
ChainResidueDetails
GGLU70-ALA96

site_idPS01199
Number of Residues20
DetailsRIBOSOMAL_L1 Ribosomal protein L1 signature. IkqIpriLGpgLNKAGkFPS
ChainResidueDetails
AKILE117-SER136

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PrvRGVAmNPvE
ChainResidueDetails
AAPRO197-GLU208

site_idPS00548
Number of Residues37
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfvdGlMihSgdpVnyyVDtavrhvlLrqGvlG
ChainResidueDetails
EALA147-GLY183

site_idPS00783
Number of Residues24
DetailsRIBOSOMAL_L13 Ribosomal protein L13 signature. VRGMLPhktkrGQaaldrLkVFdG
ChainResidueDetails
AOVAL84-GLY107

site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RrkTGGkrkpy.HkKrKyELG
ChainResidueDetails
JARG11-GLY30

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FgqdemiDviGvTkGKGykGvtsR
ChainResidueDetails
ABPHE211-ARG234

site_idPS01190
Number of Residues11
DetailsRIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRaMELLK
ChainResidueDetails
AiPRO52-LYS62

site_idPS00475
Number of Residues32
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGkGkLpkqp.ViVkakfFSrrAeekIkgvG
ChainResidueDetails
AaLYS110-GLY141

site_idPS01077
Number of Residues20
DetailsRIBOSOMAL_L37E Ribosomal protein L37e signature. GTsSfGkRrnkt.HtlCrRCG
ChainResidueDetails
AjGLY4-GLY23

site_idPS00580
Number of Residues21
DetailsRIBOSOMAL_L32E Ribosomal protein L32e signature. FiRhqsdRyvKIkrn..WRKprG
ChainResidueDetails
AePHE20-GLY40

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLApdydaldV
ChainResidueDetails
AXLYS134-VAL149

site_idPS00051
Number of Residues17
DetailsRIBOSOMAL_L39E Ribosomal protein L39e signature. KTgnkIryNskrRHWRR
ChainResidueDetails
AlLYS30-ARG46

site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgCykittvFShAqtvvlCvgCStvLcqPtG
ChainResidueDetails
cLYS36-GLY68

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GMkIgrieDvTPiPSD
ChainResidueDetails
PLEU116-ASP138

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VlKFLAAGTHLG
ChainResidueDetails
BVAL15-GLY26

site_idPS00963
Number of Residues25
DetailsRIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlLVVtDpqaDhqpLmEasyvNLP
ChainResidueDetails
BPRO119-PRO143

site_idPS01172
Number of Residues12
DetailsRIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKivLRleC
ChainResidueDetails
AoLYS61-CYS72

site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KahVaSlegIApedQvVLLaGtpleD
ChainResidueDetails
gLYS27-ASP52
fLYS24-ASP49

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. KLSKIRvVRKSIARV
ChainResidueDetails
AhLYS43-VAL57

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY
ChainResidueDetails
OVAL98-TYR128

site_idPS00700
Number of Residues22
DetailsRIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QattVknKdiRkFlDGIYVseK
ChainResidueDetails
AHGLN163-LYS184

site_idPS01104
Number of Residues15
DetailsRIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFSLeELrvaG
ChainResidueDetails
ALARG71-GLY85

site_idPS01107
Number of Residues12
DetailsRIBOSOMAL_L27E Ribosomal protein L27e signature. GKNkWFFqkLRF
ChainResidueDetails
AZGLY125-PHE136

site_idPS00358
Number of Residues17
DetailsRIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLTGQtpVfSkARyT
ChainResidueDetails
AJLEU40-THR56

site_idPS01170
Number of Residues19
DetailsRIBOSOMAL_L6E Ribosomal protein L6e signature. NrvPLRRthqkFVIATSt.K
ChainResidueDetails
AEASN185-LYS203

site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKTtGFGmIYDSldyakknE
ChainResidueDetails
ZPHE64-GLU86

site_idPS00948
Number of Residues14
DetailsRIBOSOMAL_S7E Ribosomal protein S7e signature. RLvRELEKKFSgKH
ChainResidueDetails
IARG78-HIS91

site_idPS00733
Number of Residues8
DetailsRIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH
ChainResidueDetails
bTYR73-HIS80

site_idPS01145
Number of Residues14
DetailsRIBOSOMAL_L34E Ribosomal protein L34e signature. TaSnKtrlsRTPGN
ChainResidueDetails
AgTHR15-ASN28

site_idPS01189
Number of Residues19
DetailsRIBOSOMAL_S12E Ribosomal protein S12e signature. ALQevLktAlihDGLarGI
ChainResidueDetails
NALA17-ILE35

site_idPS01171
Number of Residues26
DetailsRIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikgmgtvqk.GmpHkcYhGkTG
ChainResidueDetails
ATGLY37-GLY62

site_idPS00628
Number of Residues20
DetailsRIBOSOMAL_S19E Ribosomal protein S19e signature. PshfsrgSksVaRrVLQaLE
ChainResidueDetails
UPRO89-GLU108

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAfvAIGDyn.GhVGlGlkcsk.EVat.AI
ChainResidueDetails
DGLY119-ILE151

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSGswDgTLRLWDL
ChainResidueDetails
hALA78-LEU92
hILE120-THR134
hILE165-LEU179
hCYS207-LEU221

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvAQiyAirqSiSKAL
ChainResidueDetails
RGLY74-LEU92

site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRVAaPkhWmLdK
ChainResidueDetails
FHIS8-LYS22

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:P53026
ChainResidueDetails
AKTYR11
AoCYS15
AoCYS72
AoCYS77

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P53026
ChainResidueDetails
AKLYS91
ApCYS42
ApCYS57
ApCYS60
AALYS250

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P62906
ChainResidueDetails
AKLYS106
AdLYS70
ArLYS65
PLYS106
HSER242
HSER244
HSER247

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P62906
ChainResidueDetails
AKLYS118
AjSER97
TLYS106

site_idSWS_FT_FI5
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250|UniProtKB:P62906
ChainResidueDetails
AKLYS118
AWSER149
AJLYS154

site_idSWS_FT_FI6
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P62906
ChainResidueDetails
AXLYS14
AKLYS161
ABLYS224
ABLYS226
ABLYS386
ABLYS393
ABLYS399

site_idSWS_FT_FI7
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P83731
ChainResidueDetails
AWLYS2
AWLYS35
ACSER362
AWLYS147

site_idSWS_FT_FI8
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250|UniProtKB:P83731
ChainResidueDetails
ETRP192
AWLYS27
gLYS11
gLYS27
gLYS29
gLYS33
gLYS48
gGLN31
gGLY75
gLYS81

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:Q9D8E6
ChainResidueDetails
ACLYS361

site_idSWS_FT_FI10
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P36578
ChainResidueDetails
ACLYS239
ACLYS327

site_idSWS_FT_FI11
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate => ECO:0000250|UniProtKB:P36578
ChainResidueDetails
ACLYS361

218500

PDB entries from 2024-04-17

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