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6OZM

Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 10 min soak in 10 mM Mn2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Endonuclease Vpolymer25328048.52UniProt (Q8C9A2)
Pfam (PF04493)
Mus musculus (Mouse)
2C, D
(C, D)
DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3')polymer237293.42synthetic construct
3E, F, Q
(A, D)
GLYCEROLnon-polymer92.13Chemie (GOL)
4G, J
(A, B)
TRIETHYLENE GLYCOLnon-polymer150.22Chemie (PGE)
5H, I, N
(A, C)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
6K, L, M, O, P
(C, D)
MANGANESE (II) IONnon-polymer54.95Chemie (MN)
7R, S, T, U
(A, B, C, D)
waterwater18.0240Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight70683.7
Non-Polymers*Number of molecules13
Total formula weight1037.5
All*Total formula weight71721.2
*Water molecules are not included.

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PDB entries from 2025-12-17

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