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6OZL

Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 2 min soak in Mn2+

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Endonuclease Vpolymer25328048.52UniProt (Q8C9A2)
Pfam (PF04493)
Mus musculus (Mouse)
2C, D
(C, D)
DNA/RNA (5'-R(P*CP*GP*GP*UP*AP*AP*CP*CP*C)-D(P*I)-R(P*AP*UP*AP*UP*GP*CP*AP*UP*GP*CP*AP*UP*U)-3')polymer237293.42synthetic construct
3E, F, J, K
(A, B)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
4G, M
(A, C)
GLYCEROLnon-polymer92.12Chemie (GOL)
5H, L
(A, B)
TRIETHYLENE GLYCOLnon-polymer150.22Chemie (PGE)
6I
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
7N
(D)
L(+)-TARTARIC ACIDnon-polymer150.11Chemie (TLA)
8O, P, Q, R
(A, B, C, D)
waterwater18.0154Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight70683.7
Non-Polymers*Number of molecules10
Total formula weight877.4
All*Total formula weight71561.0
*Water molecules are not included.

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PDB entries from 2025-12-10

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