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6OZL

Crystal structure of Mus musculus (Mm) Endonuclease V in complex with a 23mer RNA oligo containing an inosine after a 2 min soak in Mn2+

Functional Information from GO Data
ChainGOidnamespacecontents
A0004519molecular_functionendonuclease activity
A0006281biological_processDNA repair
B0004519molecular_functionendonuclease activity
B0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 301
ChainResidue
AASP52
AASP240
AHOH420
CU12
CHOH201
CHOH205

site_idAC2
Number of Residues6
Detailsbinding site for residue MN A 302
ChainResidue
AHOH415
CA11
CU12
AASP52
AASP126
AHOH411

site_idAC3
Number of Residues4
Detailsbinding site for residue GOL A 303
ChainResidue
AASP32
AARG38
BLEU145
BGLU147

site_idAC4
Number of Residues4
Detailsbinding site for residue PGE A 304
ChainResidue
AHIS225
AHIS226
ACYS228
AARG229

site_idAC5
Number of Residues5
Detailsbinding site for residue NA A 305
ChainResidue
ALEU45
AGLN46
AHOH432
AHOH437
AHOH449

site_idAC6
Number of Residues6
Detailsbinding site for residue MN B 301
ChainResidue
BASP52
BASP240
BHOH412
DU12
DHOH206
DHOH207

site_idAC7
Number of Residues6
Detailsbinding site for residue MN B 302
ChainResidue
BASP52
BASP126
BHOH401
BHOH406
DA11
DU12

site_idAC8
Number of Residues3
Detailsbinding site for residue PGE B 303
ChainResidue
BHIS226
BCYS228
BARG229

site_idAC9
Number of Residues3
Detailsbinding site for residue GOL C 101
ChainResidue
CA17
CU18
CG19

site_idAD1
Number of Residues5
Detailsbinding site for residue TLA D 101
ChainResidue
DA17
DU18
DG19
DHOH208
DHOH209

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP52
AASP126
BASP52
BASP126

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Interaction with target DNA => ECO:0000250
ChainResidueDetails
ATYR91
BTYR91

218853

PDB entries from 2024-04-24

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