6NF5
BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP1 fragmentantigen binding and base-binding RM20A3 fragment antigen binding
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, G, M (A, C, J) | HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120 | polymer | 481 | 54236.8 | 3 | Pfam (PF00516) UniProt (by SIFTS) (Q2N0S6) | Human immunodeficiency virus 1 | |
| 2 | B, H, N (B, D, M) | HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp41 | polymer | 162 | 18250.5 | 3 | Pfam (PF00517) UniProt (by SIFTS) (Q2N0S6) | Human immunodeficiency virus 1 | |
| 3 | C, I, O (H, E, O) | BG18-like precursor HMP1 fragment antigen binding heavy chain | polymer | 131 | 14151.7 | 3 | Homo sapiens | ||
| 4 | D, J, P (L, F, P) | BG18-like precursor HMP1 fragment antigen binding light chain | polymer | 106 | 11253.3 | 3 | Homo sapiens (Human) | ||
| 5 | E, K, Q (K, G, Q) | base-binding RM20A3 fragment antigen binding heavy chain | polymer | 125 | 13511.1 | 3 | Macaca mulatta | ||
| 6 | F, L, R (N, I, R) | base-binding RM20A3 fragment antigen binding light chain | polymer | 128 | 13508.8 | 3 | Macaca mulatta | ||
| 7 | BA, DA, EA, FA, GA... (b, d, e, f, g...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 15 | In PDB GlyTouCan (G42666HT) | |||
| 8 | AA, HA, T (a, h, T) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 3 | In PDB GlyTouCan (G42227JK) | |||
| 9 | CA, JA, V (c, j, V) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 3 | In PDB GlyTouCan (G56014GC) | |||
| 10 | AB, BB, CB, DB, EB... (C, D, J, A, M...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 33 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 18 |
| Total formula weight | 374736.9 | |
| Branched | Number of molecules | 21 |
| Total formula weight | 12317.4 | |
| Non-Polymers* | Number of molecules | 33 |
| Total formula weight | 7299.9 | |
| All* | Total formula weight | 394354.1 |
