6MFT
Crystal structure of glycosylated 426c HIV-1 gp120 core G459C in complex with glVRC01 A60C heavy chain
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | H, A | Heavy Chain glVRC01 | polymer | 233 | 25334.3 | 2 | Homo sapiens (Human) | ||
2 | L, B | Light chain glVRC01 | polymer | 210 | 23019.5 | 2 | Homo sapiens (Human) | ||
3 | G, C | Gp120 | polymer | 347 | 38592.0 | 2 | Pfam (PF00516) UniProt (by SIFTS) (M4Q8P8) In PDB | Homo sapiens (Human) | |
4 | D, E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
5 | F | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G56014GC) | |||
6 | I | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
7 | G, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 13 | Chemie (NAG) | |||
8 | G | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
9 | C | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) | |||
10 | C | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
11 | water | water | 18.0 | 325 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 173891.5 | |
Branched | Number of molecules | 4 |
Total formula weight | 2832.6 | |
Non-Polymers* | Number of molecules | 17 |
Total formula weight | 3298.1 | |
All* | Total formula weight | 180022.2 |