6MDP
The D1 and D2 domain rings of NSF engaging the SNAP-25 N-terminus within the 20S supercomplex (focused refinement on D1/D2 rings, class 2)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Vesicle-fusing ATPase | polymer | 768 | 85509.2 | 6 | UniProt (P18708) Pfam (PF02359) Pfam (PF02933) Pfam (PF00004) Pfam (PF17862) Pfam (PF21964) In PDB | Cricetulus griseus (Chinese hamster) | N-ethylmaleimide-sensitive fusion protein,NEM-sensitive fusion protein,Vesicular-fusion protein NSF |
2 | H | Synaptosomal-associated protein 25 | polymer | 207 | 23512.4 | 1 | UniProt (P60881) Pfam (PF00835) In PDB | Rattus norvegicus (Rat) | SNAP-25,Super protein,SUP,Synaptosomal-associated 25 kDa protein |
3 | A, E | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) | |||
4 | A, B, C, D, E... | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 9 | Chemie (ATP) |
Sequence modifications
A, B, C, D, E, F: 1 - 723 (UniProt: P18708)
H: 1 - 204 (UniProt: P60881)
PDB | External Database | Details |
---|---|---|
Met -23 | - | initiating methionine |
Gly -22 | - | expression tag |
His -21 | - | expression tag |
His -20 | - | expression tag |
His -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
Asp -15 | - | expression tag |
Tyr -14 | - | expression tag |
Asp -13 | - | expression tag |
Ile -12 | - | expression tag |
Pro -11 | - | expression tag |
Thr -10 | - | expression tag |
Thr -9 | - | expression tag |
Glu -8 | - | expression tag |
Asn -7 | - | expression tag |
Leu -6 | - | expression tag |
Tyr -5 | - | expression tag |
Phe -4 | - | expression tag |
Gln -3 | - | expression tag |
Gly -2 | - | expression tag |
Ala -1 | - | expression tag |
His 0 | - | expression tag |
Ile 458 | Lys 458 | conflict |
Tyr 724 | - | expression tag |
Arg 725 | - | expression tag |
Val 726 | - | expression tag |
Arg 727 | - | expression tag |
Lys 728 | - | expression tag |
Phe 729 | - | expression tag |
Leu 730 | - | expression tag |
Ala 731 | - | expression tag |
Leu 732 | - | expression tag |
Leu 733 | - | expression tag |
Arg 734 | - | expression tag |
Glu 735 | - | expression tag |
Glu 736 | - | expression tag |
Gly 737 | - | expression tag |
Ala 738 | - | expression tag |
Ser 739 | - | expression tag |
Pro 740 | - | expression tag |
Leu 741 | - | expression tag |
Asp 742 | - | expression tag |
Phe 743 | - | expression tag |
Asp 744 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met -2 | - | initiating methionine |
Ala -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 536567.7 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 5419.0 | |
All* | Total formula weight | 541986.8 |