6M8P
Human ERAP1 bound to phosphinic pseudotripeptide inhibitor DG013
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | Endoplasmic reticulum aminopeptidase 1 | polymer | 899 | 102967.2 | 22 | UniProt (Q9NZ08) Pfam (PF17900) Pfam (PF01433) Pfam (PF11838) In PDB | Homo sapiens (Human) | ARTS-1,Adipocyte-derived leucine aminopeptidase,A-LAP,Aminopeptidase PILS,Puromycin-insensitive leucyl-specific aminopeptidase,PILS-AP,Type 1 tumor necrosis factor receptor shedding aminopeptidase regulator |
2 | a, 0, b, 1, c... | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 44 | In PDB GlyTouCan (G15407YE) | |||
3 | K, Q, T, B, E... | ZINC ION | non-polymer | 65.4 | 22 | Chemie (ZN) | |||
4 | K, Q, T, B, E... | Nalpha-[(2S)-2-{[[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]methyl}-4-methylpentanoyl]-L-tryptophanamide | non-polymer | 512.6 | 22 | Chemie (P52) | |||
5 | A, C, D, F, G... | SULFATE ION | non-polymer | 96.1 | 309 | Chemie (SO4) | |||
6 | J, P, G, D, M... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 22 | Chemie (NAG) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V: 17 - 915 (UniProt: Q9NZ08)
PDB | External Database | Details |
---|---|---|
His 26 | - | expression tag |
His 27 | - | expression tag |
His 28 | - | expression tag |
His 29 | - | expression tag |
His 30 | - | expression tag |
His 31 | - | expression tag |
His 32 | - | expression tag |
His 33 | - | expression tag |
His 34 | - | expression tag |
His 35 | - | expression tag |
Glu 38 | - | insertion |
Asn 39 | - | insertion |
Leu 40 | - | insertion |
Tyr 41 | - | insertion |
Phe 42 | - | insertion |
Gln 43 | - | insertion |
- | Cys 486 | deletion |
- | Pro 487 | deletion |
- | Thr 488 | deletion |
- | Asp 489 | deletion |
- | Gly 490 | deletion |
- | Val 491 | deletion |
- | Lys 492 | deletion |
- | Gly 493 | deletion |
- | Met 494 | deletion |
- | Asp 495 | deletion |
- | Gly 496 | deletion |
- | Phe 497 | deletion |
- | Cys 498 | deletion |
- | Ser 499 | deletion |
- | Arg 500 | deletion |
- | Ser 501 | deletion |
- | Gln 502 | deletion |
- | His 503 | deletion |
- | Ser 504 | deletion |
- | Ser 505 | deletion |
- | Ser 506 | deletion |
- | Ser 507 | deletion |
- | Ser 508 | deletion |
- | His 509 | deletion |
- | Trp 510 | deletion |
Gly 486 | His 511 | linker |
Gly 487 | Gln 512 | linker |
Gly 488 | Glu 513 | linker |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 22 |
Total formula weight | 2265278.6 | |
Branched | Number of molecules | 44 |
Total formula weight | 25807.8 | |
Non-Polymers* | Number of molecules | 375 |
Total formula weight | 47265.8 | |
All* | Total formula weight | 2338352.3 |