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6LKQ

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A30S ribosomal protein S2polymer21824253.91UniProt (C3TPN2)
Pfam (PF00318)
In PDB
Escherichia coli
2B30S ribosomal protein S3polymer20623078.81UniProt (A0A376HTV6)
In PDB
Escherichia coli
3C30S ribosomal protein S4polymer20523383.01UniProt (A0A4P8BV83)
Pfam (PF00163)
Pfam (PF01479)
In PDB
Escherichia coli
4D30S ribosomal protein S5polymer15015804.31UniProt (F4SQ30)
In PDB
Escherichia coli
5E30S ribosomal protein S6polymer10011669.41UniProt (A0A3L2GT12)
In PDB
Escherichia coli
6F30S ribosomal protein S7polymer15116861.51UniProt (D6I218)
In PDB
Escherichia coli
7G30S ribosomal protein S8polymer12914015.41UniProt (U9ZUM7)
In PDB
Escherichia coli
8H30S ribosomal protein S9polymer12714554.91UniProt (D8A919)
Pfam (PF00380)
In PDB
Escherichia coli
9I30S ribosomal protein S10polymer9811197.01UniProt (A0A5B9AU26)
In PDB
Escherichia coli
10J30S ribosomal protein S11polymer11712487.21UniProt (A0A4P8B3R1)
In PDB
Escherichia coli
11K30S ribosomal protein S12polymer12313637.01UniProt (L3C3P4)
In PDB
Escherichia coli
12L30S ribosomal protein S13polymer11412625.81UniProt (A0A069XLE9)
In PDB
Escherichia coli
13M30S ribosomal protein S14polymer10011489.41UniProt (A0A090BZT4)
Pfam (PF00253)
In PDB
Escherichia coli
14N30S ribosomal protein S15polymer8810159.61UniProt (A0A029IK47)
In PDB
Escherichia coli
15O30S ribosomal protein S16polymer829207.61UniProt (A0A029IMB2)
In PDB
Escherichia coli
16P30S ribosomal protein S17polymer809263.91UniProt (T6LV72)
In PDB
Escherichia coli
17Q30S ribosomal protein S18polymer556466.51UniProt (E9TDX6)
In PDB
Escherichia coli
18R30S ribosomal protein S19polymer799057.61UniProt (S1EA57)
In PDB
Escherichia coli
19S30S ribosomal protein S20polymer859506.21UniProt (D7ZAS2)
In PDB
Escherichia coli
20T30S ribosomal protein S21polymer516067.11UniProt (A0A5C9AJ78)
Pfam (PF01165)
In PDB
Escherichia coli
21U50S ribosomal protein L2polymer27129663.21UniProt (A0A1X3LPI5)
In PDB
Escherichia coli
22V50S ribosomal protein L3polymer20922277.51UniProt (I2X6U5)
In PDB
Escherichia coli
23W50S ribosomal protein L4polymer20122121.61UniProt (L3C159)
In PDB
Escherichia coli
24X50S ribosomal protein L5polymer17720073.21UniProt (H4IXW7)
In PDB
Escherichia coli
25Y50S ribosomal protein L6polymer17618801.61UniProt (V0AIU3)
In PDB
Escherichia coli
26Z50S ribosomal protein L11polymer14114763.21UniProt (H4J053)
In PDB
Escherichia coli
27050S ribosomal protein L13polymer14216050.61UniProt (S1EW51)
In PDB
Escherichia coli
28150S ribosomal protein L14polymer12213451.91UniProt (V0YSM1)
In PDB
Escherichia coli
29250S ribosomal protein L15polymer14314877.31UniProt (A0A037Y8L6)
Pfam (PF00828)
In PDB
Escherichia coli
30350S ribosomal protein L16polymer13615312.31UniProt (H4LI23)
In PDB
Escherichia coli
31450S ribosomal protein L17polymer12013721.91UniProt (A0A1X3LC97)
In PDB
Escherichia coli
32550S ribosomal protein L18polymer11612663.51UniProt (H4JDL8)
In PDB
Escherichia coli
33650S ribosomal protein L19polymer11413028.11UniProt (A0A0F6C7T5)
In PDB
Escherichia coli
34850S ribosomal protein L20polymer11713396.81UniProt (V6FS92)
In PDB
Escherichia coli
35950S ribosomal protein L21polymer10311586.41UniProt (L4V445)
In PDB
Escherichia coli
36a50S ribosomal protein L22polymer11012253.41UniProt (F4TL38)
In PDB
Escherichia coli
37b50S ribosomal protein L23polymer9310546.51UniProt (S1EUY1)
In PDB
Escherichia coli
38c50S ribosomal protein L24polymer10211078.91UniProt (F4TL32)
In PDB
Escherichia coli
39d50S ribosomal protein L25polymer9410713.51UniProt (D7Y4U5)
In PDB
Escherichia coli
40e50S ribosomal protein L27polymer798476.71UniProt (A0A5D8K7F9)
In PDB
Escherichia coli
41f50S ribosomal protein L28polymer778896.41UniProt (A0A5B7P765)
In PDB
Escherichia coli
42g50S ribosomal protein L29polymer637286.51UniProt (I2X6R6)
In PDB
Escherichia coli
43h50S ribosomal protein L30polymer586423.61UniProt (A0A073FR56)
In PDB
Escherichia coli
44i50S ribosomal protein L32polymer566332.21UniProt (D7XI28)
In PDB
Escherichia coli
45j50S ribosomal protein L33polymer505814.81UniProt (L3NSS9)
In PDB
Escherichia coli
46k50S ribosomal protein L34polymer465397.51UniProt (A0A1X3IEM2)
In PDB
Escherichia coli
47l50S ribosomal protein L35polymer647181.81UniProt (L3P377)
In PDB
Escherichia coli
48m50S ribosomal protein L36polymer384377.41UniProt (F4V714)
In PDB
Escherichia coli
49n50S ribosomal protein L10polymer16317634.51UniProt (A0A1X3LA41)
In PDB
Escherichia coli
50o, p, q, r50S ribosomal protein L7/L12polymer303300.94UniProt (A0A4C9D1M4)
Pfam (PF16320)
In PDB
Escherichia coli
51s16S ribosomal RNApolymer1532496563.11GenBank (1726022446)Escherichia coli
52t23S ribosomal RNApolymer2903941306.21GenBank (1036415628)Escherichia coli
53u5S ribosomal RNApolymer11838177.81GenBank (1727529157)Escherichia coli
54vPeptide chain release factor 3polymer52559152.41UniProt (C3SE77)
Pfam (PF22042)
Pfam (PF16658)
Pfam (PF00009)
In PDB
Escherichia coliRF-3
55wmessenger RNApolymer61900.21Escherichia coli
56y, z, 7, AA, BAViomycinpolymer6703.75BIRD (PRD_000226)synthetic construct
Sequence modifications
n: 1 - 163 (UniProt: A0A1X3LA41)
PDBExternal DatabaseDetails
Leu 85Ser 85conflict
Glu 160Asp 160conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains63
Total formula weight2192810.3
All*Total formula weight2192810.3
*Water molecules are not included.

225158

PDB entries from 2024-09-18

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