6KYV
Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G, I... (A, C, E, G, I...) | RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3') | polymer | 22 | 7043.2 | 6 | synthetic construct | ||
| 2 | B, D, F, H, J... (B, D, F, H, J...) | Probable ATP-dependent RNA helicase DDX58 | polymer | 684 | 78308.3 | 6 | UniProt (O95786) Pfam (PF00270) Pfam (PF18119) Pfam (PF00271) Pfam (PF11648) | Homo sapiens (Human) | DEAD box protein 58,RIG-I-like receptor 1,RLR-1,Retinoic acid-inducible gene 1 protein,RIG-1,Retinoic acid-inducible gene I protein,RIG-I |
| 3 | M, N, O, P, Q... (B, D, F, H, J...) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) |
Sequence modifications
B, D, F, H, J, L: 242 - 922 (UniProt: O95786)
| PDB | External Database | Details |
|---|---|---|
| Ser 239 | - | expression tag |
| Asn 240 | - | expression tag |
| Ala 241 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 512108.6 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 392.5 | |
| All* | Total formula weight | 512501.1 |
